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scnpilot_solids1_trim150_scaffold_295_curated_46

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 45245..45790

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 181.0
  • Bit_score: 357
  • Evalue 7.40e-96
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 181.0
  • Bit_score: 357
  • Evalue 1.00e-95
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 175.0
  • Bit_score: 170
  • Evalue 6.90e-40

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAAACGCTCCAGGCCGGTCTATCTGGCAGTGAGTTCCCGACAACGTCAATTCGAGGCGCTGACCCGCGCGCACGCCGGCGACCTGTACCGCTTCGCCTACTGGCTGTGCGGGCAGGACGCGCTGGCCCAGGACCTGGTGCAGGAGACCTTGCTGCGCGCGTGGAAAAGCCTCGATGCGCTGCGCGAGGCCGAGTCCGCCAAGCCGTGGCTGCTGACCATCCTGCGTCGCGAACACGCGCGCCTGCATGAGCGCAAGGCGCTGGATACCGTCGAGCTGGAAGACAGCCTCGCCGAGGACGCCGCCTGGGCCAGCCCCGAGCGCCACGGCGATGCCGCCGAACTGCGTGAAGCCATGTCCCGATTGCCGCACAAATATCGCGAACCGCTGCTGCTGCAGGTGCTGGGCGGCATGAGCTGCGACGAGATCGCCGCCGAGCTGGACCAGCAGCCCGGCGCGGTGATGACCCAGTTGTTCCGTGCCCGGCAGAAGCTGAAATCCATCCTGCAGGGCGGCCGCCCGGAGGCGCAGCATGGACTGCCTTGA
PROTEIN sequence
Length: 182
MKRSRPVYLAVSSRQRQFEALTRAHAGDLYRFAYWLCGQDALAQDLVQETLLRAWKSLDALREAESAKPWLLTILRREHARLHERKALDTVELEDSLAEDAAWASPERHGDAAELREAMSRLPHKYREPLLLQVLGGMSCDEIAAELDQQPGAVMTQLFRARQKLKSILQGGRPEAQHGLP*