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scnpilot_solids1_trim150_scaffold_2352_curated_7

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 4068..5405

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1163407 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 880
  • Evalue 8.70e-253
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W656_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 880
  • Evalue 6.20e-253
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 445.0
  • Bit_score: 827
  • Evalue 2.00e-237

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGTCCCAGGCTTCGCACAAGATCGGTTTCGTCAGCCTCGGCTGTCCCAAGGCGCTGGTCGATTCCGAGCGCATCCTCACCCAGTTGAAGGTCGAGGGTTACCAGATCGTGCCCAGCTACAACGAGGCCGACGCGGTGGTGGTGAATACCTGCGGCTTCATCGACGCGGCGGTGCAGGAGTCGCTGGATTCGATCGGCACGGCGCTCAACGAAAACGGCAAGGTCATCGTCACCGGTTGCCTGGGCAAGCGCGAGGCGCTGATCCGCGAGGCATATCCGGACGTGCTGTCGGTCAGCGGCCCGCAGGACTACGCCAGCGTGATGACGGCGGTGCACAAGGCGCTGCCGCCGGTGCGCAACAAGTTCATCGACATCGTGCCGGACACGGGCGTGAAGCTGACCCCGAAGCACTATGCCTACCTGAAGATTTCCGAAGGCTGCAATCACCGCTGCAGCTTCTGCATCATTCCCTCGATGCGCGGCAACCTGGTCTCGCGCCCGGTCGACGAAGTGCTGCTGGAGGCCGAGCGCCTGGTCAAGGGCGGCGTGAAGGAATTGCTGGTGATCTCGCAGGACACCAGCGCCTACGGCGTGGACCTGAAATACGCCGAGCGCGAGTGGCGCGGCAAGGCGTATCGCACGCGCATGACCGAGCTGTGCGAAGGCCTGTCGGAACTTGGCGTGTGGGCACGCCTGCACTACGTCTATCCGTATCCGCACGTGGACGAGGTGATGCCGCTGATGGCAGCCGGCAAGCTGCTGCCGTACCTGGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTGAAACTGATGAAGCGCCCGGGCAACATCGACCGGACGCTGGAGCGCATCCAGAACTGGCGCAGGCAGGTACCGGACCTGACCATCCGCAGCACCTTCATCGTCGGCTTCCCCGGCGAGACCGAGGCGGAGTTCGAGGAGTTGCTGGACTTCCTGCGCGAGGCAGAGCTCGATCGCGTGGGGGCGTTCGCCTATTCGCCGGTCGATGGCGCGAAGGCGAACGAGCTGCCCGACCCGGTCTCCGAGGAGCTGAAGGAAGACCGGCTGGAACAGTTCATGGCGGTGCAGGCGGAAATCTCCGCGGCGAAACTGCAGCGCAAGATCGGCCGCACGATCAAGGTGCTGGTCGACGAGGCCGGCGCCGATGGTGCGGTCGCGCGTTCGGCCGCCGATGCGCCGGAGATCGACGGCAGCGTGCTGATCGCCGACGGCCAGGCGCTGCGTCCGGGCCAGTTCGTCGAGGTGGTGGTGGAGTCGGCCAGCGAGCACGACCTGCACGCACGGCTGGCCCATCCGCAGCTCAAGGTCGTCTAG
PROTEIN sequence
Length: 446
MSQASHKIGFVSLGCPKALVDSERILTQLKVEGYQIVPSYNEADAVVVNTCGFIDAAVQESLDSIGTALNENGKVIVTGCLGKREALIREAYPDVLSVSGPQDYASVMTAVHKALPPVRNKFIDIVPDTGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVDEVLLEAERLVKGGVKELLVISQDTSAYGVDLKYAEREWRGKAYRTRMTELCEGLSELGVWARLHYVYPYPHVDEVMPLMAAGKLLPYLDIPFQHASPRILKLMKRPGNIDRTLERIQNWRRQVPDLTIRSTFIVGFPGETEAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPDPVSEELKEDRLEQFMAVQAEISAAKLQRKIGRTIKVLVDEAGADGAVARSAADAPEIDGSVLIADGQALRPGQFVEVVVESASEHDLHARLAHPQLKVV*