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scnpilot_solids1_trim150_scaffold_304_curated_19

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(28221..29498)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WTS7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 425.0
  • Bit_score: 766
  • Evalue 1.20e-218
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 425.0
  • Bit_score: 765
  • Evalue 1.10e-218
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AGG88406.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 425.0
  • Bit_score: 765
  • Evalue 5.10e-218

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAGCGTGACCGAAACCCATCGCACCATCGACGCCGTCTGGCGGATCGAGTCGGCCCGGTTGATCGCCGGCCTCGCCCGCATGCTGCGCGACGTCGGCCTGGCCGAGGAGCTGGCGCAGGATGCGCTGGTGGTGGCGTTGGAGCAGTGGCCGCGGAGCGGCGTGCCGGACAATCCCGGCGCCTGGCTGATGACCACCGCGAAGCGTCGCGCGATCGACCGGCTGCGCCGCGGCAAGCTGCTCGAACGCAAGCACGAGCAACTGATGCATGAGCTGGAACACGAGCAGGAATCTGCAAGGTCCGCCGACGAGGCGGCGCTGGACGACCCGTTCGGCGACGACCTGCTGCGGCTGGTCTTCACCGCCTGCCACCCCCTGCTTTCGGTGGAGGCGCGCGTGGCGCTGACCCTGCGCCTGCTCGGCGGCCTGACCACCGAGGAAATCGCGCGCGCCTTCCTGGTGCCCGAACCGACCATCGCGCAGCGCATCGTGCGCGCCAAGCGCACGCTCGCCAGGGCCGAGGTAGCCTACGAAGTGCCGCGCGGCGATGAGCTGGCCGAACGACTGTCGTCGGTGCTCGGGGTGATTTACCTGATCTTCAACGAGGGCTATTCGGCCACTGCCGGCGACGACTGGATGCGCCCGGCCCTGTGCGAGGACGCCCTACGCCTGGGCCGGGTGCTGGCCGGGCTGATGCCGCGCGAACCCGAGGTGCACGGCCTGGTGGCGCTGATGGAGCTGCAGGCCTCGCGTTCGCGCGCGCGGGTTGACGCGCACGGCGAGCCGATCCTGCTGCTGGAGCAGGACCGGGCCTTGTGGGACCGGCTGCTGATCCGCCGCGGCCTGGCCGCGCTGGAGCGCGCCGGCAAGCTGGGCGGCGCGTTCGGCCCGTATGCGCTGCAGGCGGCGATCGCCGCCTGCCATGCGCGCGCCCTGACCGGTGCGGCGACCGATTGGCCGGGCATCGCCGGCCTGTATGCGACCCTGGCCCGGGTGATGCCGTCGCCGGTCGTGGAACTCAACCGCGCGGTGGCCGTGGGCATGGCCGAGGGCGCGGCGGCGGGCCTGGAACTGGTCGATGCGCTGGTCGACGAGCCGAGCCTCAAGCGATACCACCTGCTGCCCGCGGTGCGCGGCGACCTGCTGGTGCGGCTGGGCCGTGTCGAGGAGGCGCGCCGGGAATTCGAGCGGGCCGCCGCGCTGGCCATGAACGGACGCGAGCGCGAGCTGATGCGCAAGCGCGCCCGGGCATGCGGGGAGGGCGCGCCGCCGGGGTGA
PROTEIN sequence
Length: 426
MSVTETHRTIDAVWRIESARLIAGLARMLRDVGLAEELAQDALVVALEQWPRSGVPDNPGAWLMTTAKRRAIDRLRRGKLLERKHEQLMHELEHEQESARSADEAALDDPFGDDLLRLVFTACHPLLSVEARVALTLRLLGGLTTEEIARAFLVPEPTIAQRIVRAKRTLARAEVAYEVPRGDELAERLSSVLGVIYLIFNEGYSATAGDDWMRPALCEDALRLGRVLAGLMPREPEVHGLVALMELQASRSRARVDAHGEPILLLEQDRALWDRLLIRRGLAALERAGKLGGAFGPYALQAAIAACHARALTGAATDWPGIAGLYATLARVMPSPVVELNRAVAVGMAEGAAAGLELVDALVDEPSLKRYHLLPAVRGDLLVRLGRVEEARREFERAAALAMNGRERELMRKRARACGEGAPPG*