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scnpilot_solids1_trim150_scaffold_1545_curated_3

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(1851..2882)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein AraC type n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUP8_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 452
  • Evalue 3.20e-124
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 452
  • Evalue 1.00e-124
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:ADE13448.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 452
  • Evalue 4.50e-124

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGCCACACGCAAGCCGAAACCCCGCCTCGAGACGCTGGTGCTCGCGCTCCCCGAGACCGCAGGCTCCGCACTCTACGGACTCGTCGATGTGCTGACCTCGACGGGCCATGCCTGGCAGACGCTCACGCGGACGGAACCCGTCGCCCTGCCGTTTCACGTGCGCATCGCCTCCATGAGCACGCGAGCCTTTCGCTGCGGCAACGGCATCCCGGTCTTTCCGGGCGTTTCCGTACGCGACAATCCGCGCGCGGACATCATCATCATTCCGCAACTCTGGTTCGGGCCGGATGAGCAGCTTGGCGGTCGGCATCCCGAACTGACCGCCTGGATCCGGGAGCGCTACGCGCGAGGCACCAGCATCTATTCGGTGTGCTCGGGAGCGCTGCTGCTCGCCGAGGCGGGACTGCTCGACGGCCGTGAAGCGACTTCGCACTGGGGCTATCAGCAGTTGTTCGAGCGTCGCTACCCGAACGTGCGCTTCCGGCCGGAGCCCAGCATCTGCTTCTCGGATGCGTCGGGCCAGCTCGTGACCGCGGGTGGCTCGACCTCGTGGCACGACCTGGTGTTGCACATCATCTCGCGGCACGTGAGCCCCGGCGAGGCGTTGCACATCGCGCAGGCGTATCTGCTGAAGCCGCACCACGAAGGCCAGTTGCCGTACCGGCCGCTCGTGAGGCCCTTGCCGCACCCGGATGCCGCCGTCCGCGACTGCGAGATCTGGCTGACGAAGCACTTCCGCGGGATCGGCGCCGTTGCCCGGGCCGTCAAGCACTCGCGGTTGGCGGAACGCACGCTGAAGCGACGCTTCAAGGCCGCGACCGGCCTCACCCTCATCGACTACCTTCAGAATCTGCGCATCGAGGAAGCCAAACGGCTGCTCGAGTCCTCGAAGCGCTCGGCCGACTCGATCAGCGTCGACGTCGGTTACGAAGATGCCTCGTTCTTCCGGCGCGTCTTCAAGCGGCGCACCGGATTGACGCCCGTGGCCTATCGGCGGATGTTTCAGCCGATTCAGCGAGGCACTCCATAG
PROTEIN sequence
Length: 344
MATRKPKPRLETLVLALPETAGSALYGLVDVLTSTGHAWQTLTRTEPVALPFHVRIASMSTRAFRCGNGIPVFPGVSVRDNPRADIIIIPQLWFGPDEQLGGRHPELTAWIRERYARGTSIYSVCSGALLLAEAGLLDGREATSHWGYQQLFERRYPNVRFRPEPSICFSDASGQLVTAGGSTSWHDLVLHIISRHVSPGEALHIAQAYLLKPHHEGQLPYRPLVRPLPHPDAAVRDCEIWLTKHFRGIGAVARAVKHSRLAERTLKRRFKAATGLTLIDYLQNLRIEEAKRLLESSKRSADSISVDVGYEDASFFRRVFKRRTGLTPVAYRRMFQPIQRGTP*