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scnpilot_solids1_trim150_scaffold_1136_curated_15

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(11840..12136)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR54_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 98.0
  • Bit_score: 180
  • Evalue 1.20e-42
putative RNA-binding protein, YhbY family similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 98.0
  • Bit_score: 180
  • Evalue 3.60e-43
Putative RNA-binding protein, YhbY family {ECO:0000313|EMBL:AGG89374.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 98.0
  • Bit_score: 180
  • Evalue 1.60e-42

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCCCTTTCCTCCTCGCAGATCCGCTACCTGCGCAGCCTCGCCCATGACCTGAGCCCGGTGGTCCTGCTCGGCAACAAGGGTGCCAGCGATGCCGTGGTGAAGGAACTGGACCAGGCTCTGGACATCCACGAACTGGTCAAGGTGAAACTCTCCGGCGGCGACAAGGCTGAACGGCAAGCCCAGATCGACACGTTGACCGCCGGCACCGGAGCCGAGCCGATCCACCAGATCGGCCACGTCGTGGTGCTGTTCCGCCGCAACGCCGACGAACCGAAGATCGCGCTGCCCCGCTGA
PROTEIN sequence
Length: 99
MALSSSQIRYLRSLAHDLSPVVLLGNKGASDAVVKELDQALDIHELVKVKLSGGDKAERQAQIDTLTAGTGAEPIHQIGHVVVLFRRNADEPKIALPR*