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scnpilot_solids1_trim150_scaffold_1136_curated_24

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(25100..26299)

Top 3 Functional Annotations

Value Algorithm Source
LysM repeat-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR63_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 331.0
  • Bit_score: 586
  • Evalue 1.70e-164
LysM repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 331.0
  • Bit_score: 586
  • Evalue 5.20e-165
LysM repeat-containing protein {ECO:0000313|EMBL:AGG89365.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 331.0
  • Bit_score: 586
  • Evalue 2.30e-164

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAGACAGCCGGTCCGACTCCTGCCGCTGCTCCTGTCGGCCTTGCTGGCCGCCTGTGCCGGCGCACCATCGCACACCCCACGGCCATCGAGCGCCGAGACCTCGCCGGCCACAGCGCCCTCCCCCGAAGCCGCCCCGCCGGCCGGCGAAGCCGCGGTGCCAACGCCAGCCGCCGACGTCTGGGATCGCCTGCGCGACAGTTTTGCCATGCCCGGCTGCGACGCCGATCCCGCGGTGCTGGCCTGGGCCAGACGCTACACGCGCCATCCGCAGCAGTTCGAAAGCCAGCTGCGAGCCGTATTGCCGCGCCTGGCTTATGTGCAGCAAGTGGCCGAGCGTTACGACGTCGCCGGCGAATTCGTGCTGCTGCCTTGGGTGGAAAGCCACTTCCAGCCTGTACCCGTCCGCAAGCGGCGGCCAGCCGGCATGTGGCAGATCATGCCGGTGACGGCCGGCGCAATGGGGCTGCGCGTCGACGGCCACTACGACGGTCGGCTCGACGTGCCCGCCGCCGCCAACGCCGTGATGAAACTGCTGGAGCAATACCACGAGCAGTTCGACGATTGGCGCGTGGCCGACTATGCCTACAACGCCGGCGAGTTCGCGATACGCAAGATGGCACGGGCGCACGGCATGCCGCCGGAGCAGCCGGCGATTCCCCACTGGCCTGTGCGCAAGGTGACGCGCGAGCACCTGACCAAGCTGCTCGGCATCGCTTGCGTGGTGCGCGAGCCGGCGCGTTTCGACGTCAGCCTGCCCACGCTGCCGGACGAGCAGCAGTTGGTGCAGACCGGGATTCCCCACTCGATGCCGATCGCCCGGGCAGCCGATCACGCCGGCATGTCGGTGGAGGCGCTGAAGCACTTCAACCCGGCGTTTCGCAACAACACGATCGATGCCAGCGCTGCCCCCTACCTGATGCTGCCGGCCCGGCACGCCCGGCAGTTCCGCGATGCCCTCCTGGAACAGGCCAGCCGCACCGGCGATGACCTCCTGGTCGGCACAGGCGGCGACGCCGTGGCCAACCCGGTGCCCGACGCGAGTACGGCGCGGAAGACCCACACCGTGAAGCGCGGCGACAGCCTGTGGCGGATCGCCCGCGCCTACTCGATCAGCGTCAGCCAGCTACGGCGCTGGAACCACTTGAGCGGCCATGCGCTGAAGCCCGGCCAGACACTGACGGTAAGCGCGCCGAATTAG
PROTEIN sequence
Length: 400
MRQPVRLLPLLLSALLAACAGAPSHTPRPSSAETSPATAPSPEAAPPAGEAAVPTPAADVWDRLRDSFAMPGCDADPAVLAWARRYTRHPQQFESQLRAVLPRLAYVQQVAERYDVAGEFVLLPWVESHFQPVPVRKRRPAGMWQIMPVTAGAMGLRVDGHYDGRLDVPAAANAVMKLLEQYHEQFDDWRVADYAYNAGEFAIRKMARAHGMPPEQPAIPHWPVRKVTREHLTKLLGIACVVREPARFDVSLPTLPDEQQLVQTGIPHSMPIARAADHAGMSVEALKHFNPAFRNNTIDASAAPYLMLPARHARQFRDALLEQASRTGDDLLVGTGGDAVANPVPDASTARKTHTVKRGDSLWRIARAYSISVSQLRRWNHLSGHALKPGQTLTVSAPN*