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scnpilot_solids1_trim150_scaffold_1136_curated_27

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 28029..28472

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 146.0
  • Bit_score: 297
  • Evalue 8.00e-78
Ribonuclease H n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 146.0
  • Bit_score: 297
  • Evalue 5.70e-78
ribonuclease HI similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 146.0
  • Bit_score: 293
  • Evalue 3.40e-77

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGAGCGAAGTGGAAGCATTTACCGACGGTGCCTGTCTGGGCAATCCGGGCCCGGGCGGCTGGGCGGCCTTGCTGAGGGCGCAGGGCCGCGAACGCATGCTGGCTGGCGGTGAGCCGGCCACCACCAACAACCGCATGGAGCTGATGGCCGCGATCGGCGCGCTGGAGGCGTTGAAGCGGCCTTGCCGGGTTACGCTCACCACCGATTCGCGCTATGTGATGCAGGGCATCGAACAGTGGCTGCCGAAATGGCGCGCGAATGGCTGGCGCACCGCCGACCGGAAGCCGGTGAAGAACCAGGATCTGTGGCAGCGCCTGTCCGACGCGGCCGGTGCCCATCAGGTGCGCTGGCAGTGGGTGAAGGGTCACAACGGCCACAGCGAGAACGAGCGGGTCGACCAGGCGGCGCGCGAGCAGGCCGAACTGTTGAAGGGCAGGCCATGA
PROTEIN sequence
Length: 148
MSEVEAFTDGACLGNPGPGGWAALLRAQGRERMLAGGEPATTNNRMELMAAIGALEALKRPCRVTLTTDSRYVMQGIEQWLPKWRANGWRTADRKPVKNQDLWQRLSDAAGAHQVRWQWVKGHNGHSENERVDQAAREQAELLKGRP*