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scnpilot_solids1_trim150_scaffold_526_curated_1

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 1..321

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 211
  • Evalue 3.90e-52
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 211
  • Evalue 1.20e-52
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 211
  • Evalue 5.40e-52

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ACCCCGATCGGCGACGACGAGGATTCCCACCTGGGCGACTTCATCGAGGACGGCAACGCCAGCTCGCCGATCGACTCGGCGACGGAAACCGGACTGATGGAAACCGTGCGCGACGTGCTCGCCGGGCTCACCCCGCGCGAGGCGAAGGTGCTGCGCATGCGCTTCGGCATCGACATGAACACCGACCACACGCTGGAAGAGGTCGGCAAGCAGTTCGACGTCACCCGCGAGCGGATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGTCACCCCAGCCGCTCCGAGCAGCTGCGCTCGTTCCTCGACGTGGAGTAA
PROTEIN sequence
Length: 107
TPIGDDEDSHLGDFIEDGNASSPIDSATETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDVE*