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scnpilot_solids1_trim150_scaffold_526_curated_29

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(35598..36170)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 190.0
  • Bit_score: 316
  • Evalue 2.60e-83
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL87027.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 190.0
  • Bit_score: 316
  • Evalue 3.70e-83
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 188.0
  • Bit_score: 228
  • Evalue 2.20e-57

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGTCGAGCAGCGAGACCCAGGCACGGAATGCGGATTACTGGGCCGCCCAGATGGAGGCGGTGTCGCGGCGGCGCGATCGCGACAGCTTCCTGCGCATCTACGACCACTACGCGCCGCGGGTGCGCCTGTACCTGAAGGGCATCGGCTCGCCCGAGGCGGTGGCCGAGGAACTGGCCCAGGAGGCCTTGCTGCGGCTGTGGCAGCGCGCCACGCAGTACGACGCCGCGCGCAGCAGCCTGTCCACCTGGCTGTTCCGCATCGCGCGCAACCTGCACATCGACCGCGTGCGCCGCGAGCCCTGCTGGGTGCCGATGGACGACGAGCCGGGATGGCTGGACCGGGACGACGCCGACGAATTCTCCTCGGCCGAAAGCCACGCCGCACACGCCGACCTGCAAAACCGCATCGAACGCCTTCCGGCCGTCCAGGCCCGCCTGATCCGCATGTCCTACTTCGAAGCCAAATCCCACCAGGAAATCGCCGACCAGCTCGGCATGCCGCTGGGCACCGTGAAATCCAGTCTGCGCCGCGCGTTCATGCGCCTGCAGCTCGGCGTGAGGGGGCAGCCATGA
PROTEIN sequence
Length: 191
MSSSETQARNADYWAAQMEAVSRRRDRDSFLRIYDHYAPRVRLYLKGIGSPEAVAEELAQEALLRLWQRATQYDAARSSLSTWLFRIARNLHIDRVRREPCWVPMDDEPGWLDRDDADEFSSAESHAAHADLQNRIERLPAVQARLIRMSYFEAKSHQEIADQLGMPLGTVKSSLRRAFMRLQLGVRGQP*