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scnpilot_solids1_trim150_scaffold_1109_curated_4

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(5350..6462)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 372.0
  • Bit_score: 649
  • Evalue 2.50e-183
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 369.0
  • Bit_score: 611
  • Evalue 1.40e-172
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG90395.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 369.0
  • Bit_score: 611
  • Evalue 6.30e-172

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGTCCTGGAAAAAAATCGTCCTCGTCGTGCTTGCCTTGCTGGCGGTCGCGCTGGCCATGCGCTTCTGGCGCAGTGGTGGCGGCCACGGCGAGCAGGCCGCCCGCGCGCCGGCGGCGGTGCCGGTCGAAGTGGCCAGCGCCACCCGCGGCGACGTCGAGCTGTCGCTGAAGCTGATCGGCCGGGTCGAGGCGTGGTCGACGGTGAGCCTGCGCGCGAGGGTGTCCGGCCAGCTGCAGTCGCTGTCGTTCACGCCCGGAGCGCTGGTGCGCAAGGGCAGCGTGCTGGCGCAGCTCGACCCGCGCCTGCTGCAGGCGCAGCTGGACCAGGCACGCGGCAACGTGGCGCGCGACCAGGCGCTGCTGCAGAAGGCGCAGGCCGACCAGCGGCGCTATGCCGACATGCTGGCCAGGGGCTTCGTCTCCAGGGCGGACTACGACCTGTACCAGGCCAACCTGGCGGTGGCCCGCGCCACCTTGCAGAGCGACCGCGCCGCGCAGGAGCTGGCGCAGACCCAGCTCGACTACGCCAGCATCCGCGCCCCGTTCGACGGCATTGCCGGCGCGCCGCTGGTGTGGCCGGGCGCGCAGGTCAGCGCCGACAGCACCGACCTCGTGGTGCTCAACCAGGTCGAGCCGGTGCGCGTGGCGTTCAACATTCCCGAGGACAGTCTGCCGGCCGTGCGCAATGCGCAGAAGCATGGCGCGCTCGCCGTGCAGGTGATTGTCGCCGGCGACCAGGCGGCGCCGCTGGCCGGCACGCTGGAATTCATCGACAACGCGGTCGACGCCAGCACCGGCACCATCGTGCTGAAGGCGCGCTTCGACAACGCCGAGCACCGGCTCGTCCCCGGCCAGTTCGTGCAGGTGAGCCTGCCCGCCGCGCGCCTGACCGACGTGGTCAGCGTGCCGGTGCAGGCGCTGCAGAGTTCCAGCGGCGGCAGTTTCGTGTTCGTGCTCGGTGCCGACGGCAAGGTGCGTCAGCGCTATGTCACGCCCGGTCCGACCAGCGCCGGGCACACGGTGATCGACAAGGGCCTCAAGGCCGGCGAGCAGGTGGTGACCGAGGGCCAGATGCTGCTGGTCGACGGCAGCGCCGCCGTCGTCAAGGGATGA
PROTEIN sequence
Length: 371
MSWKKIVLVVLALLAVALAMRFWRSGGGHGEQAARAPAAVPVEVASATRGDVELSLKLIGRVEAWSTVSLRARVSGQLQSLSFTPGALVRKGSVLAQLDPRLLQAQLDQARGNVARDQALLQKAQADQRRYADMLARGFVSRADYDLYQANLAVARATLQSDRAAQELAQTQLDYASIRAPFDGIAGAPLVWPGAQVSADSTDLVVLNQVEPVRVAFNIPEDSLPAVRNAQKHGALAVQVIVAGDQAAPLAGTLEFIDNAVDASTGTIVLKARFDNAEHRLVPGQFVQVSLPAARLTDVVSVPVQALQSSSGGSFVFVLGADGKVRQRYVTPGPTSAGHTVIDKGLKAGEQVVTEGQMLLVDGSAAVVKG*