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scnpilot_solids1_trim150_scaffold_1109_curated_25

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(29256..31421)

Top 3 Functional Annotations

Value Algorithm Source
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 721.0
  • Bit_score: 1372
  • Evalue 0.0
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIM01018.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 721.0
  • Bit_score: 1372
  • Evalue 0.0
(p)ppGpp synthetase, RelA/SpoT family similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 721.0
  • Bit_score: 1364
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2166
ATGACTGCGGCCACCCACTCCGCCACGGTCGACCTGTCCGCGCTGCCACCGTATGCGCTGGCCCTGAAAGAACGCATCGCCTACTTGCCCGAAGCGCAGGTCGAGCGCGTGCTGCGCGCGTTCCAGATCGGCGCGCAGGCGCACGCCGGCCAGGAGCGCAAGAGCGGCGAGCCGTACATCACCCACCCGGTGGCGGTGGCCGGCATCCTGGCCGAACTCGGGCTTGATGCCGAGACGATCATCGCGGCAATCCTGCACGACACCCTGGAAGACACCGAACTCAGCCGCGAGACGCTGGCCGCCGAGTTCGGCGAGGTGGTGGCCGAGCTGGTCGACGGCGTCACCAAGCTGGACAAGATGCGCTTCGGCAGTCGCCAGGAAGCGGACGCGGAAAGCTTCCGCAAGATGCTGCTGGCGATGGCGCGCGACATCCGCGTGATCCTGATCAAGCTGGCCGACCGGCTGCACAACATGCGCACGCTCGGCGCCAAGGACGCGCCCTCGCGCCGCCGCATTGCGCGCGAGACGCTGGAGATCTACGCGCCGATCGCGCAGCGCCTGGGCATGAACAAGTTCAAGGCGGAGCTGCAGGACCTGGGCTTCCGCGCACTGTACCCGGACCGCTACCGGGTGATCAGCGAGCGCATCCGCGCCGCGCTGGGCAACCGGCGCGAGGCGATGGGCAAGATCGAGGCGGCGCTGACCGCGCGGCTGGCCGCCGACCACCTGCCGGCGCGCGTGGTCGGTCGGATCAAGTCGCCGTGGAGCATCTATTCGAAGATGCGCGGGGACCACAAGAGCTTCGCCCAGCTGATGGACGTCTACGGCTTCCGCGTGGTCGTGGACAGCGCGATGAGCTGCTACATGGCGCTCGGCGTGGTGCATGCGCTGTACAAGCCGGTCGACCGCCGCTTCAAGGACTTCATCGCGATCCCCAAGGCGAACGGCTACCAGTCGCTGCACACCGTGCTGCTGGGCCCGTTCGGCGCACCGATCGAGGTGCAGATCCGCACCGCCGAGATGGATTCGGTGGCCGAGCGCGGGGTGGCCGCGCACTGGGCCTACAAGACCGACTCGGGCCCGGCCAACAGCGCGCAGGCGCGGGCGCGCGAATGGCTGTCCTCGCTGGTCGACAGCTCGGCGAGCACGGTGTCGTCGTCGGAGTTCATCGAGAACGTCAAGATCGACCTGTTCCCCGACGAGGTCTACCTGTTCACCCCGCGTGGCGACATCCTGTCGCTGCCGCGCAACGCCACCGCGCTGGATTTCGCCTATGCCGTGCACACCGACGTGGGCGACCACGCGGTGGCCGCACGGGTCGACAAGAAGCTGCTGCCGCTGCGCACGCGGCTGGAATCGGGCCAATTGGTGGAGATCATCACCGCGCCGTCGGCGGTGCCGAACCCGGCCTGGCTGGAAGTGGTGGTCACCGGCAAGGCGCGCACCGCGATCCGCCAGTACCTGAAACACCTGCAGCACGAGGACGCGGTGGACTTCGGCCACCGCATGCTCGACCGTGCGCTGGACGCGCAGGGCAGCAGCCTGGACGGCATTCCCGCGGCGGTGCTGGACCGCTTCCTGGAAAGCTCCAAGCTGAAGCGGCTGGAGGAATTGCTGTCCGACATCGCGCTGGGCAACCGCATGCCCGACGTGGTCGCCAGCCAGTTGCTCGCCTCGCGCGGCAAGCGGGCCGGCAAGCCGCACTCGCCGGCGCATGCGTACGAAAAGATCCGCATCACCGGCGCCGAGCGCGGCGTGCTCAGCTTCGCCAATTGCTGCCATCCGTTGCCGGGCGACGAGATCATCGGCTACCTGTCTTCGGGCAAGGGCATCGTGGTGCATCGCGAGGAGTGTCCGAACGTGGTCGAGCTGCGCAAGTCGCCGGAGCGCTGCGTGGCGATCGAGTGGGACCGCGACGTGCAGGGTGATTACCGCGCCGAGCTGCGCATCGAGGTGATCAACCGCCCCGGCGTGCTCGCCACCGTGGCCGCCGCGATCGCCGCTGCCGACTCGAACATCGAGAACGTGGAGTACGTCGAGCGCGACGCCGCCGCGGCCACGCTGCTGTTCGCGCTGGAAGTGAAGAACCGCAAGCACCTGGCCGACGTGATCCGCCGCGTGCGCCGCACCGGCGTGGTCAGCGGGGCGTATCGCCATCCCTTGTAG
PROTEIN sequence
Length: 722
MTAATHSATVDLSALPPYALALKERIAYLPEAQVERVLRAFQIGAQAHAGQERKSGEPYITHPVAVAGILAELGLDAETIIAAILHDTLEDTELSRETLAAEFGEVVAELVDGVTKLDKMRFGSRQEADAESFRKMLLAMARDIRVILIKLADRLHNMRTLGAKDAPSRRRIARETLEIYAPIAQRLGMNKFKAELQDLGFRALYPDRYRVISERIRAALGNRREAMGKIEAALTARLAADHLPARVVGRIKSPWSIYSKMRGDHKSFAQLMDVYGFRVVVDSAMSCYMALGVVHALYKPVDRRFKDFIAIPKANGYQSLHTVLLGPFGAPIEVQIRTAEMDSVAERGVAAHWAYKTDSGPANSAQARAREWLSSLVDSSASTVSSSEFIENVKIDLFPDEVYLFTPRGDILSLPRNATALDFAYAVHTDVGDHAVAARVDKKLLPLRTRLESGQLVEIITAPSAVPNPAWLEVVVTGKARTAIRQYLKHLQHEDAVDFGHRMLDRALDAQGSSLDGIPAAVLDRFLESSKLKRLEELLSDIALGNRMPDVVASQLLASRGKRAGKPHSPAHAYEKIRITGAERGVLSFANCCHPLPGDEIIGYLSSGKGIVVHREECPNVVELRKSPERCVAIEWDRDVQGDYRAELRIEVINRPGVLATVAAAIAAADSNIENVEYVERDAAAATLLFALEVKNRKHLADVIRRVRRTGVVSGAYRHPL*