ggKbase home page

scnpilot_solids1_trim150_scaffold_13594_curated_1

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 1..2307

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 769.0
  • Bit_score: 1494
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 769.0
  • Bit_score: 1492
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL14_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 769.0
  • Bit_score: 1494
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2307
GGCTCCTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGCATCGACCGCCGCCGCAAGCTGCCGGTGACGGTGCTGCTGCGCGCGCTCGGCTACAGCAACGAGGAGATGCTGGGCATCTTCTTCGAGCACAACGTGTTCCACCTGGGCAAGAAGGGTGGCACCACGCTGGAGCTGGTCGCCGAGCGCCTGCGCGGCGAGACGCTCTCCTTCGACCTGGCGATCGGCGGCAAGGTGCTGGTGGAAGCCGGCAAGCGCATCACCGCGCGCCACGTGCGCCAGCTGGCGGCCGAGAACATCACCGCGCTGGAAGTGCCGGACGACTACCCGGTCGGCCGCATCGTGGCGAAGGACATCGTCGACGCCAAGACCGGCGAGCTGCTGGCGTCGGCGAACGACGAGATCACCGCCGAGCAGCTGGAGAATTTCCGCAAGGCCGGCATCGAAGTCGTGCCGACGCTGTACGTCAACGACCTCGACCGCGGCGCCTACATCTCGCACACCCTGCGCATCGACAACACCAAGACGCCGCTGGAGGCGCTGGTGGAGATCTACCGCATGATGCGCCCGGGCGAGCCGCCGACGAAGGACGCCGCGCAGAACCTGTTCTTCAACCTGTTCTTCACCTTCGACCGCTACGACCTGTCGGCGGTGGGCCGGATGAAGTTCAACCGCCGCGTGGGCCGCAAGGACATCCTCGGCCCGGGCGTGCTGTACGACCACAAGTACTTCAGCGAGCGCAAGGAAGAGGAGGCGCAGCGGCTGGTCAAGGAGCAGGGCGAATCGTCCGACATCCTCGACGTGCTGAAGGTGCTGATCGACATCAAGAACGGTCACGGCACCGTCGACGACATCGACCACCTGGGCAACCGCCGCGTGCGTTCGGTCGGCGAGATGGCCGAGAACACCTTCCGCATCGGCCTGGTGCGCGTGGAGCGCGCCGTGCGCGAGCGCCTCAGCCTGGCCGAGGCCGATGGCCTGACCCCGCAGGACCTGATCAACGCCAAGCCGGTCGCGGCGGCGGTGAAGGAGTTCTTCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAATCCGCTGTCGGAAGTGACGCACAAGCGTCGCGTCTCTGCGCTCGGGCCGGGCGGCCTGACCCGCGAACGCGCCGGCTTCGAAGTGCGCGACGTGCATCCGACCCATTACGGCCGCGTGTGCACCATCGAGACGCCGGAAGGTCCGAACATCGGCCTGATCAACTCGCTGGCGGTGTACGCCCGTACCAATGCCTACGGCTTCCTCGAGACGCCGTACCGCAAGGTGGCCAACGGCAAGGTCACCGACAAGGTCGACTACCTGTCGGCGATCGAGGAAGGCGACCACGTGATCGCCCAGGCGAACTCGCCGCTGGACAAGCACGGCGCGTTCCTGGAGGACTTCGTGTCCTGCCGTTTCCGCGGCGAGTCCGAGCTGCGCCCGGCGTCCGAGGTCGACTACATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCGGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCGAACCGCGCGCTGATGGGCGCGAACATGCAGCGCCAGGCCGTGCCGACGCTGCGCTCGCAGACCCCGCTGGTCGGTACCGGCATCGAGCGCGCGGTGGCGCGCGACTCCGGCGTCATCGTTTCCGCCAAGCGCGGCGGCGTGATCGACCAGGTCGATGCGGCGCGCATCGTGGTACGCGTGAACGAGGAAGAGGTCGGCGACAACGACGCCGGCGTCGACATCTACACGCTGACCAAGTACACCCGCTCCAACCAGAACACCAACCTCAACCAGCGCCCGCTGGTGAACGTGGGTGACGTGGTGGCGAAGGGCGACACTTTGGCCGACGGCTCGTCGACCGACCTGGGCGAGCTCGCGCTCGGCCAGAACATGCTGATCGCCTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATCCTGCTCTCCGAGCGCGTCGTGCAGGAGGACCGCTACACCTCGATCCACATCGAGGAGCTGTCCTGCATCGCGCGCGACACCAAGCTGGGCGCCGAGGAAATCACCGCCGACATCCCGAACGTGGGCGAGCAGGCACTGGCGCGCCTGGACGAGAGCGGCATCGTGTACATCGGTGCCGAGGTCAAGGCCGGCGACATCATGGTCGGCAAGGTCACGCCCAAGGGCGAGAGCCAGCTGACACCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCATCCGACGTGAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGC
PROTEIN sequence
Length: 769
GSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYSNEEMLGIFFEHNVFHLGKKGGTTLELVAERLRGETLSFDLAIGGKVLVEAGKRITARHVRQLAAENITALEVPDDYPVGRIVAKDIVDAKTGELLASANDEITAEQLENFRKAGIEVVPTLYVNDLDRGAYISHTLRIDNTKTPLEALVEIYRMMRPGEPPTKDAAQNLFFNLFFTFDRYDLSAVGRMKFNRRVGRKDILGPGVLYDHKYFSERKEEEAQRLVKEQGESSDILDVLKVLIDIKNGHGTVDDIDHLGNRRVRSVGEMAENTFRIGLVRVERAVRERLSLAEADGLTPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNAYGFLETPYRKVANGKVTDKVDYLSAIEEGDHVIAQANSPLDKHGAFLEDFVSCRFRGESELRPASEVDYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRSQTPLVGTGIERAVARDSGVIVSAKRGGVIDQVDAARIVVRVNEEEVGDNDAGVDIYTLTKYTRSNQNTNLNQRPLVNVGDVVAKGDTLADGSSTDLGELALGQNMLIAFMPWNGYNFEDSILLSERVVQEDRYTSIHIEELSCIARDTKLGAEEITADIPNVGEQALARLDESGIVYIGAEVKAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDG