ggKbase home page

scnpilot_solids1_trim150_scaffold_915_curated_5

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 4276..6399

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 685.0
  • Bit_score: 1260
  • Evalue 0.0
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EIM02925.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 685.0
  • Bit_score: 1260
  • Evalue 0.0
Outer membrane receptor proteins, mostly Fe transport similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 690.0
  • Bit_score: 749
  • Evalue 8.20e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2124
ATGTCTGCCCGTATTGTTTGCGAGCGCGCCCGTGCGGCTGCGCTCTCGTCGCCGCACGCCTCCGCCGTGCCTCTTCCCACTCGCCGCGCCCTGGCGCGCACGATCGGACTCGCTCTGCTGCTGGGCCCGCCGTTGGCTGCGGCGGCCACCGAGCCGACCACTCAGCTGTTCGCGCCGATCGTGGTCACTGCGGTGATGCAGGACAGCCCGCTCACCGTCACCACCAACCCGAAGGCGCCGCGCCAACCGGTGCCGGCCAGCGACGGCGCGGATTTCCTGAAGACCATCCCCGGCTTCGCGGTCATCCGCAAGGGCGGCAGCAACGGCGATCCGGTGCTGCGCGGCATGGCCGGTTCGCGATTGAACATCCTGGTCGATGGCGGCCAGATCGGCGGCGGCTGCCCGTCACGGATGGACCCGCCCACCGCCTACATCTCGCCGCAGCTGTACGACCGCGTCACCGTGATCAAGGGGCCGCAGACGGTGCAGTACGGCCCGGGCAATTCCGCCGGCACGGTGCTGTTCGAGCGCGATTTCAAGCGCTACGCCGAACCGGGCCATGCGTTCGAGGGCAGCCTGCTGGGCGGGTCGAACGGCCGCAACGACCAGCGGGTCGACCTGCGCGCCGGCACGCCGGATGTCTACCTGGGCGTCAGCGCCAACCATACCCACGCCCAGGACTACGCGGATGGCGACGGCCGCCGCGTGCACTCCGCCTACGACCGCTGGAACAGCGACCTCACCCTGGGCTGGACGCCGGACGACGACACCCGCGTGGAACTCACCGCCGGCAAGGGCGACGGCCAGGCCGCCTATGCCTTCAGCAGCATGGACGGCGTGCAGTTCCTGCGCGAAAGCGTAGCCCTGAAGTTCGAGCGGCGCTACGCCGGCGGCGCGCTGCAGAAGCTCGACACCCAGCTCTACTACAACGACGCCGACCACGTGATGGACAACTACACCCTGCGCCGTCCGGACCCGCGCAGCACGATGCCGATGGCGATGGCCAGCGAGGTCGCGCGCCGCACCTCCGGCGGGCGCATCGCCGCCAGCTTCGCCTGGGGCGAGTCGCTGGAACTGGTCGCCGGCGCCGACGGTTCAGCCAACACGCACACCGCCCGCCTGGGCGGCCCCGCCGGCGGCAGGCTGCCGGACTACCGCACGCAACCGCGCCGGCGCGATGCGCGCATGGGCACGCTGGGCGTGTTCGGCGAGCTGCGCTGGACGCTGGCCGAGCGTGAACGCATGGTCGGCGGCGCGCGTGTCGACCATGCGCAGGCGCGCGGTTACAGCCTGTCCTTACCCGCAGGCATGGGCGGGGCCGCGAAGGGCGCCGCCAGCCGCGCATCAATCCTGCCCGCCGGCTTCGTGCGCTACGAGCGCGAGCTGGCCGCTGCGCCGGCCACGGTCTACGCCGGCATCGGCCACGTCGAGCGCTTCCCCGACTACTGGGAGCTGTTCGGCCGGCACGTCGACAAGAGCGTCGCCGCGTTCCGCGCCCTGGCGCCGGAGAAGACCACCCAGCTCGACGCCGGCCTGCAGTACGACGACGGCCGGCGACTGAAGGGCTGGGCGTCCGGCTACCTCGGCGTGGTCGACGATTTCATCCTGCTCGACTACGGCCGCGGCATGGCGGGCAACAGCCAGGCGCGCAACGTGCAGGCGCGCATCGCCGGCGCCGAAGCCGGCATGGTCGTTGCCTTCGACGCGCGCTGGAAGGGCGACGCCACGCTCGCCTGGGCCTGGGGCGAAAACCGCAGCGACCAGCGACCGCTGCCGCAGATGCCGCCGCTGGAAGCGCGTCTCGGGCTCACCTACGACAGCGGCGTCTGGTCGGTGGGCGCGCTGTGGCGGGTGGCCGCGGCGCAGCGCCGGGTGGCGCCGGGCAGCGGCAACATCGTCGGCCAGGACCTGGGGCCCAGCGCCGGCTTCGGCGTGTTCTCGCTCAACGCGGGCTGGCGGCTCAGCCGCACGCTCACGCTCAGCGCGGGGATCGACAACCTGCTCGACAGGACCTACGCCGAGCACGTCAACGCGGCGAGCGCGGGGCTGGTCGGCTACGTCAACACCTTGCGGGTGAACGAGCCGGGCCGCAGCAGCTGGCTGAAGCTCGACGTGAAGCTCTGA
PROTEIN sequence
Length: 708
MSARIVCERARAAALSSPHASAVPLPTRRALARTIGLALLLGPPLAAAATEPTTQLFAPIVVTAVMQDSPLTVTTNPKAPRQPVPASDGADFLKTIPGFAVIRKGGSNGDPVLRGMAGSRLNILVDGGQIGGGCPSRMDPPTAYISPQLYDRVTVIKGPQTVQYGPGNSAGTVLFERDFKRYAEPGHAFEGSLLGGSNGRNDQRVDLRAGTPDVYLGVSANHTHAQDYADGDGRRVHSAYDRWNSDLTLGWTPDDDTRVELTAGKGDGQAAYAFSSMDGVQFLRESVALKFERRYAGGALQKLDTQLYYNDADHVMDNYTLRRPDPRSTMPMAMASEVARRTSGGRIAASFAWGESLELVAGADGSANTHTARLGGPAGGRLPDYRTQPRRRDARMGTLGVFGELRWTLAERERMVGGARVDHAQARGYSLSLPAGMGGAAKGAASRASILPAGFVRYERELAAAPATVYAGIGHVERFPDYWELFGRHVDKSVAAFRALAPEKTTQLDAGLQYDDGRRLKGWASGYLGVVDDFILLDYGRGMAGNSQARNVQARIAGAEAGMVVAFDARWKGDATLAWAWGENRSDQRPLPQMPPLEARLGLTYDSGVWSVGALWRVAAAQRRVAPGSGNIVGQDLGPSAGFGVFSLNAGWRLSRTLTLSAGIDNLLDRTYAEHVNAASAGLVGYVNTLRVNEPGRSSWLKLDVKL*