ggKbase home page

scnpilot_solids1_trim150_scaffold_1328_curated_6

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 4420..4935

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 171.0
  • Bit_score: 335
  • Evalue 2.90e-89
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 171.0
  • Bit_score: 335
  • Evalue 4.00e-89
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 177.0
  • Bit_score: 320
  • Evalue 3.00e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGCGGCAGCCGGTCGGCGCGTCCTGATCGGGCGCATCGTCGGGCTGTACGGCGTGCAGGGCTGGCTCAAGATCGAATCCTGGGCCGAGCCGCGCATGCGGATCTTCGACTACCAGCCGTGGCTGCTCAGTGCAGCGCCCGGCACGGAGACGCAGGTCAGCGGAGTCAAGGGTCGTTCGCAGGGCAAGGGCATCGTGGCCCATCTGCCCGGAGTGGACGACCGGGAACAGGCAGCGGCACTGATCGGTACCGACATTCAGGTCGCCCGCGAGCAACTGCCGGCTCCCGCGGAAGGCGAGTATTACTGGGTCGATCTCGAAGGACTTGAGGTCGTCACCACGGAAGGCGTGAAGCTGGGGCGGGTCAGTCACCTGTTCGCCACCGGCGCCAACGATGTCGTGGTGGTGCGGGACGGCGAGCGCGAGCGGCTGATCCCCTTCGTCCAGGGTTCGTATGTGCGTTCGGTGGATCTGTCCGCAGGGCGCATGGTGGTGGACTGGGATCCCGAGTTCTGA
PROTEIN sequence
Length: 172
VAAAGRRVLIGRIVGLYGVQGWLKIESWAEPRMRIFDYQPWLLSAAPGTETQVSGVKGRSQGKGIVAHLPGVDDREQAAALIGTDIQVAREQLPAPAEGEYYWVDLEGLEVVTTEGVKLGRVSHLFATGANDVVVVRDGERERLIPFVQGSYVRSVDLSAGRMVVDWDPEF*