ggKbase home page

scnpilot_solids1_trim150_scaffold_2200_curated_6

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(12068..14539)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NTX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 820.0
  • Bit_score: 1533
  • Evalue 0.0
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 820.0
  • Bit_score: 1533
  • Evalue 0.0
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 820.0
  • Bit_score: 1533
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2472
ATGCGGCCGCACGAGCCTGCCGAGGTATCGCCATCGCTTCCGGATGAAACCGACTGGCCGGCGCGAGTGGTGCACGGCACGCCTGCGCTGCTGGCCTACCTCGACCTCGATCAGCGTTTCCGCTTCGTCAACGACACCCACCGCCGCTGGCTCGGCGTCGATCCGCAACAGCTGCTCGGCCAGCGCCTGGTCGACGTGGTCGGCTGGCACAACCACGCACTGGCCGAAGCGGCGCTGGCGCGCGCCTACGCCGGGCACATGGCCAGCTACGAGGGCGAGCTGCACGACGGCAACCGGCGGCGCTACGCGCACGGCAACTTCCAGCCCGACTTCGACGCCGACGGCCGCGTCCGCGGCATCTTCACCGCGCTGGTCGACATCACCGAACGGCGCACCCTCGAGCTCAAGCTGCACGAGAGCGAGCAGCGCTTCTTCGCCGCGTTCCAGCACGCCGCGATCGGCATGGCGCTGACCGGTCCGGACGGCCGTTTCCTGCGCGTCAACGCGGCGGTCTGCCAGATGCTCGGCTACCGCGAGGAGGAACTGCTGCAGCTGGACATCGCCGGCGTCACCCACCCGGACGACCTGGCCGCCGACAGCGAACTGATGGCGCAGCTGCTGGCCGGCCAGCGCGAGTCGTACCAGCTGGAGAAGCGCAACTTCCACAAGGACGGCCGCGTGGTGCACATCCAGCTCAGCGTGTCGCTGGTGCGCGACGAGGCGGGCGCGCCGCTGTACTTCGTCTCGCAGGTGCAGAACATCAGCCAGCGCAAGGCGTTCGAGGACGCGTTGCACCGCGAGCGCGAACTGGCCGAAGTGACCCTGCGCTCGATCGGCGACGCGGTGATCACCACCGACCCGCAGCTGCGCGTCACCTCGCTCAACCCGATCGCCGAGGCGATGACCGGCTGGACCGGCATCGAGGCGCAGGGGCGGCCGATCGAGGAGATCTTCCAGCTGTTCGACGCCCGCAACGGCGATGTCGTGGCCAATCCGCTGCGTGCGGCGATCGGCCACAACAGCATCGTCGACCTGGCCGGGCGCACCCTGCTGCGCCACCGCCACGGCTTCGACACGCCGGTGGAGGATTCTTCCGCGCCGATCCACGACCACGCCGGCAACGTGATCGGCGGCGTGCTGGTGTTCCACGACGTCAGCGAGACCCGCGCGCTGGCGCTGAAGATGATCCACCTGACCCAGCACGACACGCTGACCGGGCTGCCCAACCGCAGCCAGCTGCACGAGCACATCGGCCAGGCGATCGCCACCGCGAACCGGCGCCAGCAGCGCGCCGCGCTGCTCTACGTCGACATCGACAACTTCAAGCAGGTCAACGAAGCGCACGGCCACGCCGCCGGCGACCGGGTGCTGCGCGCGTTCGCCGCCCAGCTGCAGCGCTGCCTGTCCGGCGAGGAGCTGCTGAGCCGCTACGGCGGCGACGAGTTCGTGGTGGTGCTGCCGCACCTGGAAAGCGTTGGCGACGCGGCCAGCCTGGGCCAGCGGCTGATCAACCACGGCGAGCAGGCCCGCGTCGACGGCCTGCCCGAACTCGGCCTGCGGCTCAGCATCGGCATCAGCGTGTTCCCGGACGACGCGGTCGAGCCGGACGGCCTGCTGCAGCGCGCGGAGACCGCGCTGGTCGCGGTGAAGGCGCAGGGCCTGCACGGCTACCGCTTCTTCACCGCGTCGATGAACGAGCGCACGCAGGCGCGCCGGCGGATCGAGACCGCGCTGCGCCAGGCGCTGCCGCAGCACGAGCTGGACCTGCACTACCAGCCCAAGGTGGACGCGCACAGCGGCCGCATCGTCGGCGCCGAGGCGCTGCTGCGCTGGCAGGCGAACGGCAGCGAGGCGTACGCGCCGGACCAGTTCATCCCGGTCGCCGAAGACACCGGGCTGATCCTGCCGATCGGCGCCTGGGCGCTGCGCCGCGCCTGCCGGCAGGCGCGCCGGTGGCAGGATCTCGGCCACGCCATTGCGGTCTCGGTGAACGTGTCGCCGCTGCAGTTCCAGCATGCCGAGTTCTACAACTGGCTGGACGAGGTGCTGGAAGAAAGCGGCCTCGCCCCCGGCCTGCTCGAACTGGAGCTGACCGAACGCATGGTGATGTCCGGCGGCGACGCCACCACCGGCTTGCTGCAGCGGATCAAGCGGCGCGGCGTGCGGTTGTCGCTGGACGATTTCGGCACCGGCTACTGCAGCCTGTCGTACCTGAAGCACTTCCCGATCGACGCGCTGAAGATCGACCGCGTGTTCGTGCGCGACATCATCGACGACCGCGACACCGCCACCATCACCAGTGCGATCATCGCGATGGCGCGCAGCCTCGACAAGGACGTGGTCGCCGAGGGGGTGGAGACGCCCGAGCAGGGCGCCTTCCTGCGCCACGCCGGCTGCTCGCAGCTGCAGGGTTTCCTGTACGGCGCGGCGATGCCGGCGGCGGAGTTCCGCAAGCTGCTCGAATCCGCCTGA
PROTEIN sequence
Length: 824
MRPHEPAEVSPSLPDETDWPARVVHGTPALLAYLDLDQRFRFVNDTHRRWLGVDPQQLLGQRLVDVVGWHNHALAEAALARAYAGHMASYEGELHDGNRRRYAHGNFQPDFDADGRVRGIFTALVDITERRTLELKLHESEQRFFAAFQHAAIGMALTGPDGRFLRVNAAVCQMLGYREEELLQLDIAGVTHPDDLAADSELMAQLLAGQRESYQLEKRNFHKDGRVVHIQLSVSLVRDEAGAPLYFVSQVQNISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQLRVTSLNPIAEAMTGWTGIEAQGRPIEEIFQLFDARNGDVVANPLRAAIGHNSIVDLAGRTLLRHRHGFDTPVEDSSAPIHDHAGNVIGGVLVFHDVSETRALALKMIHLTQHDTLTGLPNRSQLHEHIGQAIATANRRQQRAALLYVDIDNFKQVNEAHGHAAGDRVLRAFAAQLQRCLSGEELLSRYGGDEFVVVLPHLESVGDAASLGQRLINHGEQARVDGLPELGLRLSIGISVFPDDAVEPDGLLQRAETALVAVKAQGLHGYRFFTASMNERTQARRRIETALRQALPQHELDLHYQPKVDAHSGRIVGAEALLRWQANGSEAYAPDQFIPVAEDTGLILPIGAWALRRACRQARRWQDLGHAIAVSVNVSPLQFQHAEFYNWLDEVLEESGLAPGLLELELTERMVMSGGDATTGLLQRIKRRGVRLSLDDFGTGYCSLSYLKHFPIDALKIDRVFVRDIIDDRDTATITSAIIAMARSLDKDVVAEGVETPEQGAFLRHAGCSQLQGFLYGAAMPAAEFRKLLESA*