ggKbase home page

scnpilot_solids1_trim150_scaffold_863_curated_21

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(19950..20249)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=2 Tax=Rhodanobacter RepID=I4WNR0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 2.40e-48
integration host factor, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 7.60e-49
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 3.40e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCTCTGACCAAGGCGGAAATGGCCGAGCGGCTTTTCCTCGACGTGGGCCTCAACAAGCGTGAGGCGAAGGAATTCGTGGACGCCTACTTCGAGGTGGTTCGCGGCGCCCTGGAGAACGGCGAACAGGTGAAGTTGTCCGGCTTCGGCAATTTCGATCTGCGGCTGAAGAACCAGCGGCCCGGACGCAACCCGAAGACCGGCGAGGAGATTCCGATCTCCGCCCGGCGCGTGGTGACGTTCCGACCGGGACAGAAACTCAAGGTAAGAGTCGAGGGTTATGCTGGACCAAGGGAATAA
PROTEIN sequence
Length: 100
MALTKAEMAERLFLDVGLNKREAKEFVDAYFEVVRGALENGEQVKLSGFGNFDLRLKNQRPGRNPKTGEEIPISARRVVTFRPGQKLKVRVEGYAGPRE*