ggKbase home page

scnpilot_solids1_trim150_scaffold_863_curated_24

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(23833..24192)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEH4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 228
  • Evalue 2.60e-57
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 228
  • Evalue 3.70e-57
LSU ribosomal protein L20P similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 2.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTCGTGTAAAGCGTGGCGTTACCGCCCGTCGTCGTCACAAGAAAATCATCGGCCGCGCCAAGGGCTACTACAACGCCCGTCGCAAGGTCTTCCGCGTTGCCAACCAGGCCGTCATCAAGGCCGGGCAGTACGCGTACATCGGTCGCAAGCAGCGCAAGCGCCAGTTCCGTGCACTGTGGATCGTGCGCATCAACGCCGCCGCGCGCATGTTCGGCCTGTCCTACAGCCGCCTGATCAATGGCCTGAGCAAGGCCGGCATCACCGTCGACCGCAAGGTTCTCGCTGATATCGCCGTGCACGACATCAAGGCGTTTGGTGCGATTGCCGAGAAAGCGAAGGCCGGTCTGGCCGCTTGA
PROTEIN sequence
Length: 120
MARVKRGVTARRRHKKIIGRAKGYYNARRKVFRVANQAVIKAGQYAYIGRKQRKRQFRALWIVRINAAARMFGLSYSRLINGLSKAGITVDRKVLADIAVHDIKAFGAIAEKAKAGLAA*