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scnpilot_solids1_trim150_scaffold_1315_curated_14

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(21761..22465)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NC10_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 4.60e-122
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 1.40e-122
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 6.40e-122

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCTGCCCATGCCCATGTTGCACCCGTCGATTACGCCGCGCTGGACGACCACGCGCTGGTGGCCCAGGTCCGCGCCGGCCATCGCGAGGCGTTCCGCCACATCATGCAGCGCTGCAACCAGCGCCTGTTCCGTGTCGCCCGCGCGGTGCTCGGCGAGGATTCGGAAGCGGAAGACGTGCTGCAGGAATCGTATATGCGTGCCTATCACAAGCTGGATTCGTTCCGCGGCGACTCGACCCTGCTGACCTGGCTCACCAGCATCGTGCTGAACGAGGCGCGCGGCCGCCTGCGCAAGCGCCACACCATGGTCGGCCTGGAGCAGGTCGACGCGATGCCGGACGACACCCACCAGATCGTGCAGTTCCCCTCGAAGTTCGGCAGCGAGGATCCGGCGGTGTCGGCTGCGCGCACGCAGATCCGCCACCTGCTCGAACACGCCATCGACAAGCTGCCGGAAGCGTTCCGCACCGTCTACATGATGCGCGAGGTGGAAGAGTGCTCGGTGGAGGAAACCGCCAGCCTGCTGGCGATCAAGCCGGAGACGGTGAAGACCCGCCTGCACCGCGCGCGCCGGCTGCTGCGCACCTCGCTGCAGGGCACCCTGGCCGAAACCATGAGCGGGGCGTTCCCGTTCATGGGCCAGCGCTGCGCCCGCGTCACCGATGCGGTGATGGCAAGGCTGGACGTCGAGCACACGGCCTGA
PROTEIN sequence
Length: 235
MSAHAHVAPVDYAALDDHALVAQVRAGHREAFRHIMQRCNQRLFRVARAVLGEDSEAEDVLQESYMRAYHKLDSFRGDSTLLTWLTSIVLNEARGRLRKRHTMVGLEQVDAMPDDTHQIVQFPSKFGSEDPAVSAARTQIRHLLEHAIDKLPEAFRTVYMMREVEECSVEETASLLAIKPETVKTRLHRARRLLRTSLQGTLAETMSGAFPFMGQRCARVTDAVMARLDVEHTA*