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scnpilot_solids1_trim150_scaffold_1260_curated_7

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(6241..8622)

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Rhodanobacter denitrificans RepID=I4WVM8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 793.0
  • Bit_score: 1537
  • Evalue 0.0
organic solvent tolerance protein OstA similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 793.0
  • Bit_score: 1537
  • Evalue 0.0
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 793.0
  • Bit_score: 1537
  • Evalue 0.0

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2382
GTGACGCCCAAGCTACCTCCACGCCGCCTGCTGGCGGTCGCTGCCGCCCTTGCCCTGTTCGGCGGCCAGGCCGACGCCAGCGGCACCCAGGCCCCGCCCGCGAGTCCCGCCGCCCCGATCGACCAGGCCTGTCCGCTGGGCTCGTTCCACTGCGCGCCGCGCCCGCTCAACTACGCGATGTGCCGGCCCAATGCCATGCTGGAGTTCTACGACCCCAGCCTCGGCAAGGACACCAGCCTGCGCGAGACCAGCCCGACCCTGGTGCAGGCGCAGCACGTGGACAGTTCCAACCGCTCGGTCTATCACCTGTCCGGCGAAGTGAAACTGCAGCGCGCCGACCAGCAGCTGCAGGCCGAGCGCATCGACTACAACGACCAGAGCGCCGACTACGACGCCCGCGGCAACGTGCGCTACCAGGAAGCCGGCCAGTTGCTGGCCGCCTCCAGCATGCGCGGCAACACCGAAGCCAGCCGCGGCGTCGCCAACGACGTGCGCTACCAGATGCTCGACGCGCGCGGCAACGGTACCGCTGGCGAGGGCCAGATGCTGGACGCGCAGCACACGCGCTACTCGCAGGCCACTTACTCCACCTGCGACGTCGGCCACCATCTGTGGGAGTTCCGCGCCAAGTCGATCACCATCGACAAGGAAACCGGCGTCGGCGTGGCGCGCAACGCCACCATGCGCCTGGGCAACGTGCCGTTCCTGTACCTGCCGTATTTCAGCTTTCCGGTGGACGACCGCCGCAAGACCGGTTTTCTGTACCCGACCGTCGGCCACACCAGCCGCTCGGGCTACGAGATCAGCACGCCGTACTACCTGAACCTGGCGCCGAACTACGACGCCACGCTGGACCCGCGCTACTACAGCGCGCGCGGCGCGATGCTGGCCGGCGAGTTCCGCTACCTGACGCCGGGCAGCCGCGGCCAGCTCAACGTGGAGTACGTGCCGGACGACCACGGCGAAAGCGACGGCCTCGCCGACACCCGGGGTGACTCCCGCTACCTGGTGAAGTTCGCCGACCGCACGCGGCTGTGGCAGGGCTGGCAGTTCAGCGGTTCGTACAATCACGCCTCGGACAGCAGCTACCTGTACGACTACGGCGACGCCCTGTCCCATTCCGCCGTCTACACGCTCGCTTCCAACGCCGCGATCAGCGGCGGCGGCAAGTGGTGGAACGCCTCCTTCGGCGGCACCATCTACCAGAACGTCAATCCGTTCGTGACCGACCGCGGCCTGCCGTACAGGCAGCTGCCCTACGCGAAGTTCAGCCTGGACGTGCCACTGTCGCGCTGGCTGGAATTCGGCATGGACAGCTCGGCGGTGGCGTTCCGCAAGGCCGGCTTCGTCGAGGGCCAGCGCGAGGATCTCTACCCGTACCTGCAGGCGGACTTCGGCAGCTCGGCCTGGTTCGTGCGGCCGCGGCTCGGCTATCGCTACACCGCCTACCAGCTGGGCAGCGACTACCAGGACTACGGCTACCGCGGACGGCTCGGCAGCGGCGCGACCACGCCGTTCGACCAGAAGTCGCCGAGCCGTTCGCTACCGATCGTCAGCCTCGACAGCGGCCTGGTGTTCGACCGCGCCACCACGCTGTTCGGCGACAGCTATACGCAGACGCTGGAGCCGCGGCTGTACTACCTGTACGTGCCGTACCGCAACCAGGACAACCTGCCGCTGTTCGACACCCGGGTGATGTCGTTCGACTACTGGCAGCTGTTCTCGACCAACCAGTTCTCCGGCGCCGACCGCCAGATGGACGCGAACAACCTCACCGCGGCGCTCACCACCCGCCTGCTCGACGACGGCGGCGTCGAGCGGGTATCGGCCAGCATCGGCCAGATCCACTATTTCTCCCCGCAGAAGGTGCTGAACACCGACTGGGTCCGCTCGGCCTACGTCGCTCAGCTCGACGTGCAACTCAGCGAGCGCTGGCGCCTGAACAGCGCCTACCAGTGGAGCCCGAACACCCGCCTCACCGACCTGGCCGCGGTGCAGCTGCAGCGGCGCCTGCGCACCGACGGCATCTTGAATTTCTCCTATCGCTATCGCCGCGGCCTGCTGGAACAATACAACGCCTCCGTGGTCTACCCGGTGTCCGAGCGCTGGCGACTGGTGGGCGCGTGGACTTATTCGGTGAAGGATCGCGAAAGCGTCGATGCACTGGCCGGCGTGGAGTACGACAGTTGCTGCGTGTCGCTGCGGCTGGTCGGGCGCAGCTACGTGAACCAGGGCTACTACGGCTTCGGTCCCGCGCCGGCCGGCGGCAACATCAACCATCGCGACAATGCCGTCATGTTCGAGGTGGTTTTCAAGGGCCTGGGCTCCACCGGCGGCCAAATCGATCCACTGCTGCGCCGTGATATTCTCGGCTATCAATAA
PROTEIN sequence
Length: 794
VTPKLPPRRLLAVAAALALFGGQADASGTQAPPASPAAPIDQACPLGSFHCAPRPLNYAMCRPNAMLEFYDPSLGKDTSLRETSPTLVQAQHVDSSNRSVYHLSGEVKLQRADQQLQAERIDYNDQSADYDARGNVRYQEAGQLLAASSMRGNTEASRGVANDVRYQMLDARGNGTAGEGQMLDAQHTRYSQATYSTCDVGHHLWEFRAKSITIDKETGVGVARNATMRLGNVPFLYLPYFSFPVDDRRKTGFLYPTVGHTSRSGYEISTPYYLNLAPNYDATLDPRYYSARGAMLAGEFRYLTPGSRGQLNVEYVPDDHGESDGLADTRGDSRYLVKFADRTRLWQGWQFSGSYNHASDSSYLYDYGDALSHSAVYTLASNAAISGGGKWWNASFGGTIYQNVNPFVTDRGLPYRQLPYAKFSLDVPLSRWLEFGMDSSAVAFRKAGFVEGQREDLYPYLQADFGSSAWFVRPRLGYRYTAYQLGSDYQDYGYRGRLGSGATTPFDQKSPSRSLPIVSLDSGLVFDRATTLFGDSYTQTLEPRLYYLYVPYRNQDNLPLFDTRVMSFDYWQLFSTNQFSGADRQMDANNLTAALTTRLLDDGGVERVSASIGQIHYFSPQKVLNTDWVRSAYVAQLDVQLSERWRLNSAYQWSPNTRLTDLAAVQLQRRLRTDGILNFSYRYRRGLLEQYNASVVYPVSERWRLVGAWTYSVKDRESVDALAGVEYDSCCVSLRLVGRSYVNQGYYGFGPAPAGGNINHRDNAVMFEVVFKGLGSTGGQIDPLLRRDILGYQ*