ggKbase home page

scnpilot_solids1_trim150_scaffold_369_curated_26

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(28679..30343)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane protein, probably involved in in nutrient binding protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D7Y5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 552.0
  • Bit_score: 816
  • Evalue 1.40e-233
Putative outer membrane protein, probably involved in in nutrient binding protein {ECO:0000313|EMBL:EOZ95332.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 552.0
  • Bit_score: 816
  • Evalue 1.90e-233
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 565.0
  • Bit_score: 464
  • Evalue 5.40e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Indibacter alkaliphilus → Indibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1665
ATGCAAAAAATATTTTATTTTCTGATATTATCAGGGCTGCTAATGACAGCCAGTTGTAAAAAACTGTTAGATAAACTTCCCCTGGATAGCCCTTCTTCAGCTTCATTTTTTAATAATAAGACAGAAGTGGATATGGGCATACTGGGATGTTATTCAAGGATAACAAACCGTATAACTCTAAAAGGAGCTATGCCTTGGATCGTAACTTTGGATTGCACAAGCGATATAAACTGGAACCGTGATGCTTCTCCTATCGGTTCTCTTGGAAATGGTACTGCTGCTAGCGATAATAGTACTGCACTAAGTGCCTGGAGCGATTTTTATGCAGTTATCGCCAGAACCAATTTTCTTTTGGATAATATTGGTAATGCTGAAAAAACAGTAAATGCTAATTATCTGCATCAGGTAGTTGCAGAAGCAAGGTTTGTGAGAGCCTATAGTTACTTTTATCTTACAGGTTTTTTTGGGGATGTTCCTTTAATCACCAAAAGTATTTCATTGGAAGAATCCGCTATCCCCAGAACACCTAAAAAAGACATCATTGATTGGATATTAAAGGAAATGGATGAAGCAGCCCCTGATCTACCTCTTTTTTATGAAGGCCACTCCGGCCGTGCAACCAGTGTAGCTGCTTACTTCCTTAAAGCCTATGCCGCTTTGTGTGACAACCGATGGGCAATCGCAGCGCAGGCTGCAAAAAAAGCAATAGACCTCGGGCATTATAAATTGGAACCTAATTACGCTAAGCTTTTTACTTATGCTGGTGAAAAATCGTTAGAGCGAATCTTTTCAATGCAGTACCTCAGAGGCGTAAATACACACATTATCTTTCGGCAATTCGGGTCGAGGTTGGTTGCTGGTGTTTCTAATGAGGTGCCCACTCAGGCAATGGTTGACTCTTATGAATGCATAGATGGATTAACAATAGATAAATCTTCCCTGTACAATCCTCAAAAGCCCTATGAGAATAGAGATCCGCGATTAAATATGACAATTGCTGTACCGGGTACCATTTATATGGGAATTCAATTCGAAACAAATCCTGATAGTTTAAAAGTGTGGAATTATAATGTTTCGCCTCCTGCGCGTGTTAACAATACAGATGCGACAAATACTTATGCAACATTTACCAGTTATTTATGGAGGAAATGGATGAATATTGAAGATCTCAAGTTTACACAAGAGAACGAAGGGGACATTATATTAATGCGTTATGCAGAGCTATTACTCATTTATGCGGAAGCAAAAATTGAGGCTAACGACATTGATCAATCAGTCTATGATGCAATAAATGCAGTTCGGAATCGTGCAGGTATGCCGTCGGTACCACAGGGTAGCACACAGAGTTATTTACGTTCCGTTGTCAGAAGGGAACGTAAAATAGAACTTGCAATGGAAGGTCGGCGGTTATTTGATATCCGGCGCTGGAAGATTGCTGAAAAGGTGATGAATGGGCCAAGATACGGAAATAGTAAAACTGCATTTCTTGTTTCACCACCTTCTTTGGATGAAAATACTTCACCGGACTATTCTAATATTCCAAATAAGAACATCATGAGGGTTATAGAAACTATGGTATTTAACCCTGCTAAGCATTATTTATGGCCGATTCACCCGGTTGAACTGCAAACTAATCCCGCATTAACTCAAAATCCTAATTGGTAA
PROTEIN sequence
Length: 555
MQKIFYFLILSGLLMTASCKKLLDKLPLDSPSSASFFNNKTEVDMGILGCYSRITNRITLKGAMPWIVTLDCTSDINWNRDASPIGSLGNGTAASDNSTALSAWSDFYAVIARTNFLLDNIGNAEKTVNANYLHQVVAEARFVRAYSYFYLTGFFGDVPLITKSISLEESAIPRTPKKDIIDWILKEMDEAAPDLPLFYEGHSGRATSVAAYFLKAYAALCDNRWAIAAQAAKKAIDLGHYKLEPNYAKLFTYAGEKSLERIFSMQYLRGVNTHIIFRQFGSRLVAGVSNEVPTQAMVDSYECIDGLTIDKSSLYNPQKPYENRDPRLNMTIAVPGTIYMGIQFETNPDSLKVWNYNVSPPARVNNTDATNTYATFTSYLWRKWMNIEDLKFTQENEGDIILMRYAELLLIYAEAKIEANDIDQSVYDAINAVRNRAGMPSVPQGSTQSYLRSVVRRERKIELAMEGRRLFDIRRWKIAEKVMNGPRYGNSKTAFLVSPPSLDENTSPDYSNIPNKNIMRVIETMVFNPAKHYLWPIHPVELQTNPALTQNPNW*