ggKbase home page

scnpilot_solids1_trim150_scaffold_60_curated_3

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 5938..6603

Top 3 Functional Annotations

Value Algorithm Source
Soluble ligand binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK46_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 239.0
  • Bit_score: 174
  • Evalue 1.40e-40
Soluble ligand binding domain-containing protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 239.0
  • Bit_score: 174
  • Evalue 4.50e-41
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEV96480.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 239.0
  • Bit_score: 174
  • Evalue 2.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCTTATTTTCAGGGTATCCCTAATGATACCACTCTTACCAACCTGGTATCTAAAGATTTTGAACCTAAAATTCAGAAAGGCGATCTGCTGTCCATTACTATTGCCAGTTTAAGTCCGGAGAATACTGCTATTTACAATGCTCCTCAAAATGCACAGGGACCGGCAACCGGCTACTTAGTTGATGAAAACGGAAATATTCCTTTTGTAAAACTGGGAGCCATTCATGCAGAAGGCATGACCCGTAAAGAATTAAAATCGAAATTAGAAAAAGACCTTACGCCTTACCTGGCACAGGCCGTAGTAGCTGTAGGTTTTTTAAACAGGCACGTTACTCTTATGGGAGGCGTGTCTCCGCAGGTGCTCCCTATGCCAGGCGACAATATGACTTTGCTGGATGCTTTGGCGGCTTCCGGAGATATAAGCGAGAAGGGGAGGGCTGATAACGTATTAGTGATCCGTGAAAAAGGCAATTCAAAAGAATTTAAGCGCTTGAATCTCACTGATGAATCTGTATTTTATTCTCCTTATTTTTATTTAAAACCTAATGATATAGTTTATGTAGAACCGGTAAAGAAAAAGCAGGACAATACATTGAGGATTATATCGTATATTACTTCAGGGCTTTCAATTGCTATTTTTATAATTGATCGTATTTTAAAATAA
PROTEIN sequence
Length: 222
MAYFQGIPNDTTLTNLVSKDFEPKIQKGDLLSITIASLSPENTAIYNAPQNAQGPATGYLVDENGNIPFVKLGAIHAEGMTRKELKSKLEKDLTPYLAQAVVAVGFLNRHVTLMGGVSPQVLPMPGDNMTLLDALAASGDISEKGRADNVLVIREKGNSKEFKRLNLTDESVFYSPYFYLKPNDIVYVEPVKKKQDNTLRIISYITSGLSIAIFIIDRILK*