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scnpilot_solids1_trim150_scaffold_635_curated_1

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 3..764

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 253.0
  • Bit_score: 422
  • Evalue 1.10e-115
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 253.0
  • Bit_score: 422
  • Evalue 4.80e-115
DNA-directed RNA polymerase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00036A86EE similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 253.0
  • Bit_score: 433
  • Evalue 1.90e-118

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 762
ATCATTCTGAATCTGAAGCAGGTTCGCTTTAGAAAGAAGACTGACCAGGAAGGAGGCGTAGAAAAAGTAAGTTTGTCTTTAAAAAACAGGACTGAATTTACCGCAGGTATGATTGGAGAAGCTTCTCCTACTTTTGAAGTAATGAATCCTGATTTACTTATTTGCACAATGGATAATTCTGCCAAATTAGATATTGAGATCTCTATTGGCAAGGGCCGTGGTTATGTGCCTGCAGAAGAAAATAAGGAAAAGAGCAGCCACTTTGGATACATTCCTGTAGATGCTATTTACACTCCAATCAAAAATGTAAAATACAGTATTGAAAATACAAGGGTTGAACAAAGAACTGATTTTGAAAAATTGGTAATGGAAGTAGTTACCGACGGAACCATTCATCCTGAAGAAGCTGTAAAACAGGCATCAAGGATACTGATACAGCACCTGATGATCATTACTGATGAAAATATCACTTTTGATAATAAAGAAGAAAAGAAAGAAGACCTTGTAGATGAACAGACTTTACAACTTCGTAAGGTATTGAAAACTCCTTTGGAAGATCTGGATCTTTCTGTAAGAGCATTCAATTGCTTAAAAGCTGCAAAGATCAATTCATTAAGCGAACTGGTACAGTACGAACAGGAAGACCTGATGAAATTCAGAAACTTTGGACAAAAATCATTAAGTGAAATTGAACAGGTTTTGAATGAAAGAGGATTAGGTTTTGGGTTAGACCTTAGTAAATTAAAATTAGACGAAGAATAA
PROTEIN sequence
Length: 254
IILNLKQVRFRKKTDQEGGVEKVSLSLKNRTEFTAGMIGEASPTFEVMNPDLLICTMDNSAKLDIEISIGKGRGYVPAEENKEKSSHFGYIPVDAIYTPIKNVKYSIENTRVEQRTDFEKLVMEVVTDGTIHPEEAVKQASRILIQHLMIITDENITFDNKEEKKEDLVDEQTLQLRKVLKTPLEDLDLSVRAFNCLKAAKINSLSELVQYEQEDLMKFRNFGQKSLSEIEQVLNERGLGFGLDLSKLKLDEE*