ggKbase home page

scnpilot_solids1_trim150_scaffold_1115_curated_17

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 22196..23071

Top 3 Functional Annotations

Value Algorithm Source
AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZD9_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 291.0
  • Bit_score: 377
  • Evalue 1.10e-101
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 291.0
  • Bit_score: 377
  • Evalue 3.50e-102
AraC protein arabinose-binding/dimerisation {ECO:0000313|EMBL:ACU04635.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 291.0
  • Bit_score: 377
  • Evalue 1.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCAATTATTACAAATACCTGCCTACAAGCACGGAAGATGAAAAATGGGGCATGCATGTACTGAGTGCAGGCTGTAACAGGATAAGTGCTCATGTTGATTACCCTGCGCCGGAACACCCCGCTCATCACTATTTCAATTGGAGCAAAGGACGTGTGCTGGATGAGTATCAAATTATTTATATTGCCGCAGGAAGTGGCCTTTTTGAATCCGCTAGTTGTAAGCAGCAGCGAATTAAAGAGGGAACTATTTTATTTTTATTTCCCGGAGAGTGGCACCGGTTCAAACCAGATCAACAAACCGGATGGGATGAGTTCTGGGCAGGATTTAAAGGACTAATCATCGAAAATATAGTATCCCAACATTTTTTATCAAGAAAAAATGCTATCATGGAAATTGGATTATCTGAAAAAATAATTCAATTATTTACAAATATCATTGAGATTACAAAAGAAGAAAGAACCGGATACCAGCCTTTGGTATCCGGCATTGTAATGCACCTGCTCGGTGAAATTCATTCGCTCTCAAGACAGCAACTTTATACCGGAGAAGAAATAACTGAATCTATTATTAACCGGGCAAGAATTATCTTCAGAACTAATATTGACCAGGATATAGACATGGAAAAATTGGCAAAAGAATTATGTGTAAGCTATGCCTGGCTTCGAAAAGCTTTTAAAACATATACAGGCATCGCCCCTCATCAATACCTTATCCAATTAAAAATTGAAAAAGCAAAGATGCTTCTCATCAACCGTTCCAGGTCAATAAAAGAAATTGCTTTCAGTTTAAATTTTGAATCTGCTTTTTACTTTTCAAAATTATTTAAAGAAAAGGTAGGACTATCTCCAAAAGAATACAGAAAAAAAATTTGA
PROTEIN sequence
Length: 292
MTNYYKYLPTSTEDEKWGMHVLSAGCNRISAHVDYPAPEHPAHHYFNWSKGRVLDEYQIIYIAAGSGLFESASCKQQRIKEGTILFLFPGEWHRFKPDQQTGWDEFWAGFKGLIIENIVSQHFLSRKNAIMEIGLSEKIIQLFTNIIEITKEERTGYQPLVSGIVMHLLGEIHSLSRQQLYTGEEITESIINRARIIFRTNIDQDIDMEKLAKELCVSYAWLRKAFKTYTGIAPHQYLIQLKIEKAKMLLINRSRSIKEIAFSLNFESAFYFSKLFKEKVGLSPKEYRKKI*