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scnpilot_solids1_trim150_scaffold_373_curated_7

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(10036..10659)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGF9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 190
  • Evalue 2.30e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ24511.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 190
  • Evalue 3.30e-45
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 177.0
  • Bit_score: 119
  • Evalue 1.60e-24

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 624
ATGATACCGGAAAGCATTACAGAAGATGCATGGACGCTTTTGAGAAATGGTGATGAGAACGCATTGCTGACATTATACAACCACCATTATTTAGGGTTGATCAATTTTGGTATTAAGATAACCGGTGATCGTTCATTTGCTAACGACTGCATCACCCAATTACTGATAGAGCTTTGGGATAAAAGAGCAAATCTACCTTCCGTAAAAAATGTAAGAGGCTATCTTCTCACCTCTTTAAAGCATAAAATATTTTTTGAAATAAAAGTAAAGCAAATAAGAGATTCGAAACTCAATGCACTACAGGCGTTTGAGAACGGCGAAGAACTACCCTATGAGGAACTTCTCATCCAACTGCAAACAAATGAAGAATTGAAGAAAAAATTAAACAAGGCTTTTGCAAAGCTTACCCCACGGCAAAAGCAATTATTAAGAATGAAATTTTTTGATGACATTGATTATGATGAGATTGCTCATGTTTGTAATATTACAAGGCGCACAGCTTACAACATCATCCACGACTCACTAAAAGTGCTCAGAGCTGAGCTTTACAAAATTGAAAAAGGCCATATAGAAATAAACAGCTCCACCTTATTAATAATGGCGGTTATTTTATGGATGACTTAG
PROTEIN sequence
Length: 208
MIPESITEDAWTLLRNGDENALLTLYNHHYLGLINFGIKITGDRSFANDCITQLLIELWDKRANLPSVKNVRGYLLTSLKHKIFFEIKVKQIRDSKLNALQAFENGEELPYEELLIQLQTNEELKKKLNKAFAKLTPRQKQLLRMKFFDDIDYDEIAHVCNITRRTAYNIIHDSLKVLRAELYKIEKGHIEINSSTLLIMAVILWMT*