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scnpilot_solids1_trim150_scaffold_258_curated_35

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 45996..46775

Top 3 Functional Annotations

Value Algorithm Source
GGDEF domain protein (Selenocysteine protein) n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZ00_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 259.0
  • Bit_score: 311
  • Evalue 8.70e-82
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 259.0
  • Bit_score: 311
  • Evalue 2.70e-82
GGDEF domain protein (Selenocysteine protein) {ECO:0000313|EMBL:AEL28145.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 259.0
  • Bit_score: 311
  • Evalue 1.20e-81

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Taxonomy

Cyclobacterium marinum → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGATATCAAAAACAATTCTCTGTGTTACTTTATTTTTCTATATGCCCTTATACATGTTTGCGAACAGCTTAAAAAATAATAATGCAGCGGATACGTCAAAGAAGCTGCCATCCCCGTTATACAAGGTTGCCAGGCTTAATAAAAAAATGGCTGTTGATGGCAACTGGAACAAAGCTGAATGGAAGAAAGTGAAAGCCGTGAAAATTACTAATTATATGGGCAAGCTTCCGGCATTCAGGCCGCAGGCAGAGGCAAAAATGATGTACGATAATGATAACGTATATGTGATCTTCCGGGTAAAAGACCGGTATGTTCATAGTTTAGTCCAGAAATACAATGGGAATGTTTCAGGAGATGCATGTGTAGAGTTCTTTTTCGCTCCTGATACTCATTTTCCTGAAAGATATTTTAATCTTGAAATTAATGCCGGAGGTACGCCATTGCTGTTTTATATATTGCCGCCTTATCCCAAGGAAAAATACACCAGGCTTGATCCGGAAGATATAAAACAAATAGAGATTGCGCATTCATTACCCAAAGTGGTTGATCCGGAAATAAAGGATCCTGTAACCTGGACCCTTGAGTACCGGATACCTCTTTCCCTGCTTGAAAAATTTTCAAATGTCACCCGGCCAGCGCCCGGTGTCACCTGGAAAGCTAATTTCTATAAAACGGCAAGCCAAAGCTCAAATCCACATTGGATCACATGGGCGGTGGTTGACAATCCTAAACCTAATTTCCATTTACCTCAATTTTTTGGAACATTGGAGTTTAAATAA
PROTEIN sequence
Length: 260
MISKTILCVTLFFYMPLYMFANSLKNNNAADTSKKLPSPLYKVARLNKKMAVDGNWNKAEWKKVKAVKITNYMGKLPAFRPQAEAKMMYDNDNVYVIFRVKDRYVHSLVQKYNGNVSGDACVEFFFAPDTHFPERYFNLEINAGGTPLLFYILPPYPKEKYTRLDPEDIKQIEIAHSLPKVVDPEIKDPVTWTLEYRIPLSLLEKFSNVTRPAPGVTWKANFYKTASQSSNPHWITWAVVDNPKPNFHLPQFFGTLEFK*