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scnpilot_solids1_trim150_scaffold_450_curated_11

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 15045..15761

Top 3 Functional Annotations

Value Algorithm Source
GntR domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ3_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 231.0
  • Bit_score: 298
  • Evalue 5.40e-78
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 231.0
  • Bit_score: 298
  • Evalue 1.70e-78
GntR domain protein {ECO:0000313|EMBL:ACU05771.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 231.0
  • Bit_score: 298
  • Evalue 7.60e-78

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGCAATTAGCGGCAGTAGAAAAAAAAACACCTACATTAGAAAAATTATATCCTATTGAAAATCAGACTCAGGTAGATAAGATTGAAATCAGCTTACAGGAATACTTTAGAAATGGAGATTTTCAACCGGGCGATCCTATTCCAAAAGAGTTGGAACTGGCAAAGGCATTAGGTGTTAGCCGTACTTCAGTAAGAGAAGCGTTATCAAGATTTAAAACTTTGGGGATTATAGAATCCAGAAAAAATAGGGGTATGATCATTACTCATCCTGATATACTATATAACATGGAAAGAGTAATAGACTTACAACTACTGGATAAAGGAACTATAAAAGATATTTTTGAATTGAGGCTGGTACTGGAAATAGGCATCGCGGATTTACTTTTTTTAAGAAAAACAGATTCAGATCTGAAAATTCTTGAAGAAATTGTTGAGAAGGATGAAAAATCGAATAATAATGACGAGCATAAAAAATATGATGTGGAATTTCATTCTATGCTGTATAAAATTTCGGGAAATCAAACCATCCAACGTTTTCAAAACATATTACTCCCAATTTTTGATGGTATAGATAAAAATCTATATACTATAAATATAGAAGAAACCCCTGGTTATGTATATCACAGAGGATTACTAAATACTTTAAAAGAAGGAACTCCTGAAGAATTTAGAAATAAAATGCGAAGCCATTTGATGCAATATTTTAATAAGCTATAA
PROTEIN sequence
Length: 239
MQLAAVEKKTPTLEKLYPIENQTQVDKIEISLQEYFRNGDFQPGDPIPKELELAKALGVSRTSVREALSRFKTLGIIESRKNRGMIITHPDILYNMERVIDLQLLDKGTIKDIFELRLVLEIGIADLLFLRKTDSDLKILEEIVEKDEKSNNNDEHKKYDVEFHSMLYKISGNQTIQRFQNILLPIFDGIDKNLYTINIEETPGYVYHRGLLNTLKEGTPEEFRNKMRSHLMQYFNKL*