ggKbase home page

scnpilot_solids1_trim150_scaffold_388_curated_33

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(32342..35470)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VNZ8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 987.0
  • Bit_score: 1453
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EPR71666.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 987.0
  • Bit_score: 1453
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 990.0
  • Bit_score: 1452
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3129
ATGACTCGTAATGTCCGCCCAAAACAACAACAACGTTTTATCGGGTTGCACTTCAGAAATAGAATGCTTGTTAAAAAGCCATCTATCAAAAACGTTATACGAATAGCAATACTAATGAGTATTTCATTGCTTGCTATCCATGACAAATCATTGTTCGCTTCACCTTTAAAAAATTTCCAGGCAAATATCGTAACCGGAAGAGTTAGTAATTCCAATGGGGAGCCTCTCATTGGAGTGAGTATTACGGTCAAGGGAAGCAATGTAGGTACCTCCACTAATGCGCAGGGTGATTATTCCATAGAAGTTCCGGGAAATGGAACATTGGTATTTTCCTATGTAGGCTTTGCAACAAAGGAAGAGCCTGTAAATGGACGGTCGGTTATCGAAGTAGTTTTAAGTGCCAGCGTTTCTGAATTAGACCAGGTAATAGTGATTGGATATGGCACACAGAAGAAAAGTGATCTGACAGGTTCAATAGCCAGGATCACTATGGATGATAAGGCCACCCAGGCGAATGTGAACCTTTTCCAGGCATTGGTAGGCGCCTCTGCAGGGGTAAACCTTGAAGAAAGAGGCGGTTCATCTGGCGAGCCTACTCTTTCCGTAAGAGGACAAACTTCATTATCTGCATCAGACAAGCCTTTGATTGTTCTTGATGGTGTGATCTACAATGGCAGCATATCCAATATAAATGTGAACGATGTGGAGACAATAGATATCCTTAAGGACGCCAGCGCTGCGGCAGTTTTTGGAGCACGGGCAGCTAATGGGGTGTTACTCATTACCACCAAAAAAGGTAAATCAAAAAAACCGGTTGTTTCATTAAGCGGATACGCCGGGTTTCAGGATATGACCAATAACCCGATGAGAGTAATGAATGCCGACGAGTTTGCCGTTAGGCTGCTTGACTGGAATTGGGAAAACAAGGTGTATGCCTGGTATAAAACCAACCCTACGAGCGCAGCAGGAAGGCCTGTGAGGCCCGATGCTACCAATCGGGAAGTAGTAGCTTCTTATTTTAAAACTTATGAAGAAAAGCAAAATTACCTGGATGGAAAATCCATTGATTGGGTTAAGGAAGTCCTGCGTAAAGGGGCAATGCAAAACTATAATGTAAGCCTCCAGGGAAGCGCTAACAACACTTCCTACTATTTATCAGGGTCTTATTCCAACATTGAAGGGATTCAGTTGAATGATAATTTTAAGAGAACCACATTGCACATGAACCTGGACAGCAAAGTAAATGACTGGCTTACTTTAGGAGTAAACACCTCATATAGTTACATGGATAACTCAGGCATACCCGCAAGCCTGGCCAGTGCACGGGTAGCGAGCCCTCTGGCCAACAACTATATAGGTAAGCCCAACTATGATATTTATCTCAGTGGTGAATTATTTCAACCTTATCCTTTGGTAAATCTTTATATTGATAATTCGGATATAAGCAATGAGCTTTTTGCAGTAGGAAGCGCTAAAATAAAGGTTCCCTGGGTAAAGGGCTTACAATATGAATTTAATTATTCTCAGGTTTACGCAAACACAAATAATTACACATTCAATTCAAATGCTACACCCGCAGGTGTGAATAACCGGGGATTAGGCGTAAAAAATCCATCGGAGTCAAGAAACTGGAATATCAATAATATCATCACTTATTCGCGGACTTTTGGAGACCATTCGGTAAATTCTACCTTTCTTTTTAGTAGAGAACTCAATAAAGGAAATTCTACTACGGCAAGCGCAGAAGGGTTTGATAATGAAATCCTCGGCTATAATAACCTGGGACTTGGCGAAGGGCCAACCGTAGCATCTACTGCTTATGAAGAAGACAATATTGCCTATATGGCTCGTGTTAACTATAGCTATAAGTCACGGTACATGTTTACAGGTACAGTACGCCGCGATGGTTTTTCCGGATTTGGCGCTGACAAAAAGTTTGCAACGTTTCCTTCTGCTTCTTTAGCGTGGGTGGCCTCAGAAGAATCATTTTTACAGGATAAAGGATTGTATTTAAAACTAAGGACCTCTTATGGTGAGAATGGAAACCAGGGGATAGGCCGTTATTCAAGCTTATCGAGAATGGCTACGCTTCCCTATGTTTATGGATCAGCGACTGCTATAGGCCTTTATCCAAGCACCTTAGGCAATATAGATCTGGCCTGGGAGACAACAGCTTCCTATAATGTCGGTGTGGACTTCGGCTTCCTAAAAAACAGGCTCACCGGTTCGTTAGACCTTTATACTGCTAAAACCAGCAATGTATTGGTGCAAAGGCAACTTCCACGTTCTGCCGGTTATTCAAGTATATGGACCAATATCGGCGGTATTGATAACAAAGGGATCGAGCTTGAATTGAAATCTGTCAATATTGATAGAGGCGCTCTCAGGTGGGAAAGTAACTTTGTATTTGCCCTTAACAGAGACAAGATCAGTAAACTATATGGCGGTAAAAATGACAATGATATTGGCAACGGATGGTTTGTGGGTGAGCCTATCAGCGCTATTTATGATTATAAAATGGCTGGCGGAGTCTGGACAGAAGATGAATTTTTTAAGGGGCAAATTCCTTATGCAGGATGGTACCCCGGCCAGTTCAGATATGTTGACCTGAATGGCGATAAAGCGATAACGCCTACCGCAGACCGGGAGGTAATTGGATATAAGACGCCGAGTTACAGGTTTAGCCTTAATAACATGGTATCTTATAAGAATTTCACACTTTCTGTATTTATCAATTCCATTCAGGGAGGTAAGAAGTTTTACCTGGCAGATAATGCGATGTACATTAATCCTCTTTATTATTACCCTGAGAGACAAAATAACTCAGCAATCAATGCTTATTGGAGGCCGGATGCACCTACTAAGAATACTACTGGTATTTATAATATACCACCGGTTCAGAGTGGTATTTACCAAAGTAGGAGTTTTGTAAGATTACAGGATGTTTCTCTTTCTTATGCTTTGGGTAAAAAAATGCTGGATAGACTGAAGATGCAATCTGCCCAGGTATATGTATCCAGTAAAAATCCTTATGTGTGGACGAACTGGCAGGGATGGGATCCTGAAATAGGGGTAAGCGATACGCCTCTTATGAGAAATTTTATTGTTGGGTTAAGATTTAGTTTATAA
PROTEIN sequence
Length: 1043
MTRNVRPKQQQRFIGLHFRNRMLVKKPSIKNVIRIAILMSISLLAIHDKSLFASPLKNFQANIVTGRVSNSNGEPLIGVSITVKGSNVGTSTNAQGDYSIEVPGNGTLVFSYVGFATKEEPVNGRSVIEVVLSASVSELDQVIVIGYGTQKKSDLTGSIARITMDDKATQANVNLFQALVGASAGVNLEERGGSSGEPTLSVRGQTSLSASDKPLIVLDGVIYNGSISNINVNDVETIDILKDASAAAVFGARAANGVLLITTKKGKSKKPVVSLSGYAGFQDMTNNPMRVMNADEFAVRLLDWNWENKVYAWYKTNPTSAAGRPVRPDATNREVVASYFKTYEEKQNYLDGKSIDWVKEVLRKGAMQNYNVSLQGSANNTSYYLSGSYSNIEGIQLNDNFKRTTLHMNLDSKVNDWLTLGVNTSYSYMDNSGIPASLASARVASPLANNYIGKPNYDIYLSGELFQPYPLVNLYIDNSDISNELFAVGSAKIKVPWVKGLQYEFNYSQVYANTNNYTFNSNATPAGVNNRGLGVKNPSESRNWNINNIITYSRTFGDHSVNSTFLFSRELNKGNSTTASAEGFDNEILGYNNLGLGEGPTVASTAYEEDNIAYMARVNYSYKSRYMFTGTVRRDGFSGFGADKKFATFPSASLAWVASEESFLQDKGLYLKLRTSYGENGNQGIGRYSSLSRMATLPYVYGSATAIGLYPSTLGNIDLAWETTASYNVGVDFGFLKNRLTGSLDLYTAKTSNVLVQRQLPRSAGYSSIWTNIGGIDNKGIELELKSVNIDRGALRWESNFVFALNRDKISKLYGGKNDNDIGNGWFVGEPISAIYDYKMAGGVWTEDEFFKGQIPYAGWYPGQFRYVDLNGDKAITPTADREVIGYKTPSYRFSLNNMVSYKNFTLSVFINSIQGGKKFYLADNAMYINPLYYYPERQNNSAINAYWRPDAPTKNTTGIYNIPPVQSGIYQSRSFVRLQDVSLSYALGKKMLDRLKMQSAQVYVSSKNPYVWTNWQGWDPEIGVSDTPLMRNFIVGLRFSL*