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scnpilot_solids1_trim150_scaffold_369_curated_6

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4936..6396)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 1.30e-197
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 5.70e-197
RNA-splicing ligase RtcB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK26_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 485.0
  • Bit_score: 695
  • Evalue 4.00e-197

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1461
ATGAAGAAAATAAAATTAACCGGCAAGCAATTACGCACCATTGGATACCCCGAAGGACCGGTAATAAGCGTGGCTATGAACACGATTGAAAAACATTACAAATTTGAAAGCGAAGAAAAGGTGATGGTTATATTAAAAGCAGTACTCGCTTCGCCTATTGAATATGCAAACGATGCAGTGCTGGGACTGATAACAGAAAAACTAATGCCTGCTAAAACCCTTACCAGCGAAAGGCTTGGGGAGGCCGTGTCCTTAAATCAAACCGGCATTCAGTTCCATATTTTCGGAAGAGAGCATATTGAAGAAGGTGCCATCAACCAGATGTACCAGGCGGCAAAATTACCGGTGGCTGTGGCTGGAGCATTAATGCCTGACGCGCATCACGGATATGGATTGCCGATTGGCGGTGTGCTGGCTACAGAAAATGCCATCATTCCTTATGGTGTGGGCGTGGATATTGGTTGCAGAATGTGTTTGTCTGTTTTTGATATTAATCCAAAAGAATTGTTGCAGAGGGAATCTTTTTTTACAAGAGAATTAAACGAAGCCACCTTATTCGGCAGCGGAAGGCAATTTGAAACAGCAGGAAAGCATGAAGTGCTGGACAGGAAAGAATTTAGTGAAATAGAAATGCTGAAACCCTTGCAGGCAAAGGCTGCAAGGCAGTTAGGCTCTTCAGGTTCAGGAAATCATTTTGTAGAATTTGGTGAAATAGAAATCAGTGAAGAAGATGAAATTCTGGGAATTGCCCCTGGAAAATATTTGGGGCTTTTATCACATTCCGGTTCCAGGGGATTGGGCGCAATGATTGCTGGCCATTACACACAGCTGGCCAGGCAAAAAAGACAATTACCCGGAGAGGCAAAGAACCTTGCATGGCTCAATTTAGATGAAGAAGAAGGAATGGAATACTGGCTGGCAATGAATCTTGCGGGATATTATGCATCTGCCAATCATCATATCATTCACGAAAAAATTGCAAAGCAGTTGGGACGTAAACCGGTAAAAATGGTAGAGAACCATCACAACTTTGCATGGAAGGAAATGTATGATGGCAAAGAAGTAATAGTACATCGTAAAGGTGCTACGCCTGCCGGTAAAAATGTATTGGGAATCATTCCGGGTTCCATGACAGCGCCGGGTTATATAGTAAAAGGAAAAGGCGAAACATCTTCTTTATCTTCCGCATCGCATGGCGCAGGAAGAAAACTCAGCAGGACATTGGCTTTAAATTCTATTACGCAAAATGCGTTGAAGAATGAATTGGACAAACATGGAGTAACTCTGTTAGGCGGCGGATTGGATGAAGCGCCCTTTGCTTATAAAGATATTGATGAAGTAATGCAATCACAATTACATTTAGTGAAAGCAGTCGGAAAATTCATTCCTAAAATTGTAAAGATGGACGGAACAGCGCCACGAAAAAAGAAATGGAAAAACTATGAAAATGCAGGCGAATGA
PROTEIN sequence
Length: 487
MKKIKLTGKQLRTIGYPEGPVISVAMNTIEKHYKFESEEKVMVILKAVLASPIEYANDAVLGLITEKLMPAKTLTSERLGEAVSLNQTGIQFHIFGREHIEEGAINQMYQAAKLPVAVAGALMPDAHHGYGLPIGGVLATENAIIPYGVGVDIGCRMCLSVFDINPKELLQRESFFTRELNEATLFGSGRQFETAGKHEVLDRKEFSEIEMLKPLQAKAARQLGSSGSGNHFVEFGEIEISEEDEILGIAPGKYLGLLSHSGSRGLGAMIAGHYTQLARQKRQLPGEAKNLAWLNLDEEEGMEYWLAMNLAGYYASANHHIIHEKIAKQLGRKPVKMVENHHNFAWKEMYDGKEVIVHRKGATPAGKNVLGIIPGSMTAPGYIVKGKGETSSLSSASHGAGRKLSRTLALNSITQNALKNELDKHGVTLLGGGLDEAPFAYKDIDEVMQSQLHLVKAVGKFIPKIVKMDGTAPRKKKWKNYENAGE*