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scnpilot_solids1_trim150_scaffold_11389_curated_1

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(3..1808)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 602.0
  • Bit_score: 1155
  • Evalue 0.0
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 606.0
  • Bit_score: 1058
  • Evalue 0.0
Ribonuclease E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAR9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 602.0
  • Bit_score: 1155
  • Evalue 0.0

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGACCACGCGCATGTTGATCGACGCGCGGCACCGGGAAGAAACCCGGGTCGCCGTCACCAAGGGAAACCGCATCGAGGAGTTTGATTTCGAGTCCGCCGAGCACAAGCAGCTCAAGGGCAATATCTATCTGGCCAAGGTAACCCGCGTCGAACCGTCGCTGCAGGCGGCGTTCGTCGAATATGGCGGCAATCGCCACGGCTTCCTGGCCTTCAGCGAAATCCACCCCGACTATTACCAGATTCCGAAGGAAGACCGCGAAGCCTTGCTGCGCGAAGAGGCGGAGCATGCCGCCGAAGCCGCGATGCGCGCCGAGGAAGACCTCGACGAGCTGGAAGGCGATGTGGCCGATGTCGACGAGCCCGGCGACGATGACGCCGCCGTTGCCGCCCCCGAAACCATCGGCGAGGACAGCGACGACGATGGCGGCGAAGATTCCGCGGACGACGCCGAGGGCGAAGATGGCGAAGAAGCGCGCGACGATCGCGACGACAAGGGTCGCCGGGGCCGCGGGCGGGGCCGGGGTCGCAAGGGCGGCCGCGGACGCGGACGCCGCGACGAGGATGAAAATGGCGAAAGCCGCATGTCGCTGCGCCGCAAGTACAAGATTCAGGACGTCATCCGTCGCCGCCAGGTGATGCTGGTGCAGGTCGTCAAGGAAGAGCGCGGCAACAAGGGTGCGGCGCTGACCACCTATCTGTCGCTGGCCGGCCGCTATTGCGTGCTGATGCCCAACACGATGCACGGCGGCGGGATCAGCCGCAAGATTTCGAATGGCGCCGATCGCCGCAAATTGAAGGCGATGATCGACGAGCTCAACCTGCCGCCGTCGATGGGCTGCATCGTCCGAACCGCGGGGATGAGCCGCACCAAGACCGAGATCAAGCGCGACTTCGACTATCTCGCCCGGCTGTGGGACGAGATTCGCGAAAAGACGCTGGGGTCGAGCGCGCCGGCGCTGATCCATTCGGACAGCGACCTTGTGAAACGTGCGATCCGCGACATCTATCACCGCGACATCGAGGAAGTGCTCGTCGAGGGCGAAGAGGGCTATAAGGCGGCGAAGCAGTTCATGAAGCTGCTGATGCCCAGCCACGCCCGGCGCGTGAAGCAATATGCCGACCCCGTTTCGCTCTATCAGCGCTATGGCGTCGAAGATCAGCTCGCCGGGATGCTCAATCCGGTCGTCCAGTTGAAATCGGGCGGCTATCTGGTCATCAACCCGACCGAGGCGCTGGTGTCGATCGACATCAACTCGGGCCGCTCGACGCGCGAGCATAATATCGAACAGACCGCGCTCAGCACCAATCTCGAGGCGGCGCACGAAATCGCCCGCCAGCTTCGCCTGCGCGACATGGCGGGCCTGATCGTCATCGACTTCATCGACATGGATCATGGCTCGAACGTCCGCAAGGTCGAGCGCGCGATGAAGGATGCGCTCAAGAACGACCGCGCGCGCATCCAGGTCGGCCGCATCTCGGGCTTCGGCCTGATGGAAATGAGCCGCCAGCGGCTACGCACCGGCGTGCTCGAAGCGTCGACGCGCCCCTGCCCGCATTGCGAAGGCACCGGCCTCGTCCGCACCGCATCGTCGGCGGGTCTCAGCGCGCTGCGCCTGATCGAAGAGGAAGCCGCACGCGGCAAGGGCAGCAAGATCATCCTGCGCGCGAGCCAGGAAGCGACCTTCTATCTCCTCAACGAAAAGCGCCGCGAACTGCGCGATATCGAGGATCTGTACGGCGTCAGCGTCGAAATCCTGCCCGACGGCGAAACCGAAGGCGCGCGCATGGCGATCGAGGTCGGCGGC
PROTEIN sequence
Length: 602
MTTRMLIDARHREETRVAVTKGNRIEEFDFESAEHKQLKGNIYLAKVTRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYYQIPKEDREALLREEAEHAAEAAMRAEEDLDELEGDVADVDEPGDDDAAVAAPETIGEDSDDDGGEDSADDAEGEDGEEARDDRDDKGRRGRGRGRGRKGGRGRGRRDEDENGESRMSLRRKYKIQDVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTMHGGGISRKISNGADRRKLKAMIDELNLPPSMGCIVRTAGMSRTKTEIKRDFDYLARLWDEIREKTLGSSAPALIHSDSDLVKRAIRDIYHRDIEEVLVEGEEGYKAAKQFMKLLMPSHARRVKQYADPVSLYQRYGVEDQLAGMLNPVVQLKSGGYLVINPTEALVSIDINSGRSTREHNIEQTALSTNLEAAHEIARQLRLRDMAGLIVIDFIDMDHGSNVRKVERAMKDALKNDRARIQVGRISGFGLMEMSRQRLRTGVLEASTRPCPHCEGTGLVRTASSAGLSALRLIEEEAARGKGSKIILRASQEATFYLLNEKRRELRDIEDLYGVSVEILPDGETEGARMAIEVGG