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scnpilot_solids1_trim150_scaffold_22670_curated_2

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 1215..2933

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZH8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 573.0
  • Bit_score: 1115
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 573.0
  • Bit_score: 1115
  • Evalue 0.0
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 573.0
  • Bit_score: 1056
  • Evalue 0.0

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGGCCACCAAGAACACCGAAGCCGACACCGACGCGCCGCTGATCGACCTCAACGAGGCCGACGTCAAAAAGCTGATCGCGCGCGGCAAGAAGCGCGGCTACCTGACCTACGACGAGCTCAACGAAGCCCTGCCGCAGGATCAGATGTCTTCGGAGCAGATCGAGGATATCATGTCGGCGATCTCCGACATGGGCATCAACATCGTCGAAAGCGACGAGGATGTGCAGGAAGAAGCCGAACAGGAAAGCGATGACGATATCGACGTCAGCGCCAACACGGGTTCGGTGTCCAATCCCGCGATCGAAAAGAAGAAGGAAACGGTCGATCGCACCGACGACCCGGTGCGCATGTACCTGCGCGAAATGGGCGCGGTCGAGCTTTTGAGCCGCGAAGGCGAAATCGCGATCGCGAAGCGCATCGAGGCGGGCCGCGACACGATGATCCTCGGCCTGTGCGAAAGCCCGCTGACCTTCAACGCGATCATTGAATGGTCGAACGCGCTCAACAACGGCGACATGCAACTGCGCGAGATCGTCGATCTCGAAGCGATGCTGTCGAAGGATCCGGCGCCGGAAAACCTCGATGACGAGGGCCAGGGCGACGACGGCGAAATCAGCGAAAAGACCGCGGGCGTCTCGTTCAAGGACGAGGACGAGGTCGAGGAAGAACCTTCGGCCGACGAAGATGACGAGGACGGTGAAGGCTCGTCGGGCAAGCGCGAAAGCTTTGAGGAAGACGACGAGGACAACACGCTGAGCCTCGCCGCGATGGAAGAATTGCTCAAGCCCGACGCGCTCGAGAAATTCGCCAATATCACCAAGAGCTTCAAGGCGTTCCAGAAGCTTCAGGACGCCCGGCTCGAGGCGCTGTCGACGGCGGGCGACTTCCCCGACGCGCAGGAAAAGAAATATCACAAGCTGCGCGAGGAACTCACCGCGCAGGTCGAAAGCGTGCAGTTCCACGGCACCAAGATCGAATATCTGGTCGATCAGCTTTACAGCTACAACCGGCGCCTGACTGCGCTCGGCGGCCAGATGCTGCGCCTTGCCGAACGCCATAAGGTACCGCGCAAGGCCTTCCTCGACCATTATGTCGGGCGCGAGCTCGAAGAAAACTGGCTCGACGAAGTCGGCAAGCTCGACAAGAAGTGGGCGGCGTTCGCCGAGAATGAGGGCGCGGCGGTCGACCGCATCCGGACCGAGATTTCGGAAATCGCCCAGGCGGCGGGTATGAGCCTGCCCGAGTTCCGCCGCGTCGTGAACATGGTCCAGAAGGGCGAGCGCGAAGCGCGCATCGCCAAGAAGGAAATGGTCGAGGCGAACCTGCGTCTCGTGATCTCGATCGCGAAGAAATATACCAACCGCGGCCTGCAGTTCCTCGACCTCATTCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGACAAATTCGAGTATCGCCGCGGCTACAAGTTCAGCACCTATGCGACCTGGTGGATCCGGCAGGCGATCACCCGCTCGATCGCCGACCAGGCGCGTACGATCCGCATCCCGGTCCATATGATCGAGACGATCAACAAGCTGGTGCGCTGCAGCCGCCAGTTCCTCCACGAAAGCGGCCGCGAGCCGACGCCGGAGGAAATGGCCGAGCGTCTGTCGATGCCGCTCGAAAAGGTCCGCAAGGTGATGAAGATCGCCAAGGAGCCGATCAGCCTCGAAACGCCGATCGGCGACGAGGAA
PROTEIN sequence
Length: 573
MATKNTEADTDAPLIDLNEADVKKLIARGKKRGYLTYDELNEALPQDQMSSEQIEDIMSAISDMGINIVESDEDVQEEAEQESDDDIDVSANTGSVSNPAIEKKKETVDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMILGLCESPLTFNAIIEWSNALNNGDMQLREIVDLEAMLSKDPAPENLDDEGQGDDGEISEKTAGVSFKDEDEVEEEPSADEDDEDGEGSSGKRESFEEDDEDNTLSLAAMEELLKPDALEKFANITKSFKAFQKLQDARLEALSTAGDFPDAQEKKYHKLREELTAQVESVQFHGTKIEYLVDQLYSYNRRLTALGGQMLRLAERHKVPRKAFLDHYVGRELEENWLDEVGKLDKKWAAFAENEGAAVDRIRTEISEIAQAAGMSLPEFRRVVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRCSRQFLHESGREPTPEEMAERLSMPLEKVRKVMKIAKEPISLETPIGDEE