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scnpilot_solids1_trim150_scaffold_8585_curated_4

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(1508..3181)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbE n=1 Tax=Sphingobium xenophagum RepID=UPI000361BB6A similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 549.0
  • Bit_score: 977
  • Evalue 6.10e-282
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:AJA11516.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 557.0
  • Bit_score: 1092
  • Evalue 0.0
type IV secretion system protein VirB4; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 549.0
  • Bit_score: 970
  • Evalue 1.80e-280

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
CGCTGGTCGACCCGCGCGATCATGCTCGACAAGACCGACGCGACCAAGCTGCTGACGAAAATCCGGCGGCAATGGTTTGCCAAGCGCAAGTCGATCGCCGCGATCCTCAAGGAGGTGATGACCAACGAGCAATCGGCGCTCGTCGACAGCGACGCCTCGAACAAGGCCGCCGATGCCGACATGGCCTTGCAGGAGCTTGGCGCCGATCATGCCGGCGTCGCCTATGTGACCGCGACCGTCACCGTGTGGGACAGTGACGCGGCGCTCGCCGCGGAGAACCTCCGGCTGGTCGAGAAGGTCATCCAGGGGCGCGACTTCACCTGCACGATCGAGGGCATGAACGCGATCGAGGCCTGGCTCGGGAGCCTGCCCGGTCACGCTTATGCCAATGTCCGCCAGCCGCCGATCTCCACCCTCAACCTCGCCCACATGATCCCCCTGTCCGCGGTGTGGGCGGGGGCGGAACGGGACGAGCATTTCGGAGACGCCCCCTTGCTCTACGGCAAGACCGAAGGCTCGACCCCGTTCCGCCTTTCGCTCCATGTCGGGGACGTCGGTCATTGCCTCGTCGTCGGTCCGACGGGGGCGGGCAAGTCGGTGCTGCTCGCGACGATGGCCATGCAGTTTCGCCGCTATCCGGGCTCGCAAATCTTCGCGTTCGATTTCGGAGGCTCGATCCGCGCCGCGGCGCTCGCGATGGGCGGCGACTGGCAGGATCTCGGCGGGGCGCTCCACGACGGCGAGGGCGGCGTGGCGTTGCAGCCGCTCGCCCGGATCGACGAGGCGTCCGAGCGGAGCTGGGCGGCCGAATGGCTCGCCGCGCTGTTCGCGGGCGAAGGCATGATGATCGACCCGGCGGCGAAGGAGCATCTCTGGTCTGCGCTGACCTCGCTCGCGACGGCACCTGCCGCCGAGCGCACGCTGACGGGGCTCGCGGTCCTCCTCCAGTCGCGCGACCTCAAGCAGGCGCTCGCGCCCTATCTGGTCGGCGGGCCCTGGGGGCGGCTGCTCGATGCCGACGACGAGCGGATCGGAGCCGCCCGCGTCCAGGCCTTCGAAACCGAAGGCCTTGTCGGCGCCGCGTCGGCGGGACCCGTCCTGTCCTATCTGTTTCACCGGATCGCCGGACGGCTCGACGGCTCGCCGACCCTCATCATCATCGACGAAGGCTGGCTCGTGCTCGACAGCCCCGCCTTCGCGGCGCAGCTGCGCGAATGGCTGAAGACGCTCCGCAAGAAGAATGCGAGCGTGGTCTTCGCAACGCAGAGCCTTGCGGACATCGAAACGTCGAGCATCGCCCCCGCGATCATCGAGAGCTGCCCGACCCGCATGTTCCTGCCGAACGAGCGCGCGCTCGAACCGCAGATTGCCCGCATCTACGAGCGCTTCGGCCTCAACGACCGGCAAATCGAGATACTGAGCCGGGCGACCCCGAAGCGCGATTATTATTGCCAGTCGCGGCGCGGTAATCGCCTCTTCGACTTGGGGCTGGGCGAGGTCGCGCTCGCCTTCACCGCGGCATCCTCGAAGACCGACCAGACGCGCATCGCCGAACTGTTCGCAGCGCACGGCCCCGACGGGTTCGCGGCCGCCTGGCTTTCCCACCGCAAGCTCGAATGGGCGGCCGAGCTGCTCCCCACCATTGCCGCCCCCAATGAGGAGTTCCCCCGATGA
PROTEIN sequence
Length: 558
RWSTRAIMLDKTDATKLLTKIRRQWFAKRKSIAAILKEVMTNEQSALVDSDASNKAADADMALQELGADHAGVAYVTATVTVWDSDAALAAENLRLVEKVIQGRDFTCTIEGMNAIEAWLGSLPGHAYANVRQPPISTLNLAHMIPLSAVWAGAERDEHFGDAPLLYGKTEGSTPFRLSLHVGDVGHCLVVGPTGAGKSVLLATMAMQFRRYPGSQIFAFDFGGSIRAAALAMGGDWQDLGGALHDGEGGVALQPLARIDEASERSWAAEWLAALFAGEGMMIDPAAKEHLWSALTSLATAPAAERTLTGLAVLLQSRDLKQALAPYLVGGPWGRLLDADDERIGAARVQAFETEGLVGAASAGPVLSYLFHRIAGRLDGSPTLIIIDEGWLVLDSPAFAAQLREWLKTLRKKNASVVFATQSLADIETSSIAPAIIESCPTRMFLPNERALEPQIARIYERFGLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLGEVALAFTAASSKTDQTRIAELFAAHGPDGFAAAWLSHRKLEWAAELLPTIAAPNEEFPR*