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scnpilot_solids1_trim150_scaffold_16947_curated_2

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(385..1443)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 686
  • Evalue 1.90e-194
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 352.0
  • Bit_score: 670
  • Evalue 4.10e-190
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXT4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 686
  • Evalue 1.40e-194

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGACTGTCAATATCCGGAACTGGCAGGAATTGAAGAAGCCCAGCAACCTGGAAATCAAGGCTGGCAGCGACAGCAAGCGCAAGGCCACCTTCGTCGCCGAACCGCTCGAACGCGGCTTCGGCCTGACGCTTGGCAACGCGCTGCGCCGCGTGCTCCTGTCGTCGCTCCAGGGTGCGGCCATCACGTCGATCAAGATCGAGAACGTCCTGCACGAATTCTCGAGCCTGGCCGGCGTGCGCGAGGACGTGACCGACATCGTCCTCAACGTGAAGCAGATCGCGCTCAAGATGGAAGGCGAAGGCCCGAAGCGGCTGCAGCTTTCGGCGACCGGTCCCGCGACCGTCAAGGCCGGCGACATCATGGTGTCGGGTGACATCAAGGTGATGAACCCCGATCATGTGATCTGCCACCTCGACGACGGGGCGACGCTGAACATGGAACTCGTTGCCGACACCGGCAAGGGCTATGTTCCCGCGACGGCCAACCGTCCGGCCGACGCGCCGATCGGCCTGATCCCGGTCGATTCGCTCTACTCGCCGGTGCGTCAGGTCGCCTACAAGGTCGACAATGCCCGCATCGGTCAGGAACTGGACTATGACAAGCTGTCGCTGACCGTCGATACCGACGGTACCGTGACCCCGGAAGATGCCGTCGCCTATGCTGCCCGCATCCTCCAGGACCAGCTTCAGGTCTTCGTCCACTTCGAAGAAGCGATGAACGACAGCGGCCTCATCGGCATGGCGGCTCCGTCGGCTTCGACCGAGGAATCGGACGTCAACCAGCTCAACCGCTTCCTTCTCAAGAAGGTCGACGAGCTCGAACTGTCGGTCCGTTCGGCCAACTGCCTCAAGAACGACAACATCATCTACATCGGCGACCTGGTCCAGAAGACCGAGGCCGAGATGCTCCGTACGCCGAACTTCGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTGCTCTCGTCGATGGGTCTGCGCCTCGGCATGGACATCCCCGGCTGGCCGCCGGAAAACATCGAGGAAATGGCCAAGAAGCTCGAACAGGAGCTGCTGGGTTAA
PROTEIN sequence
Length: 353
MTVNIRNWQELKKPSNLEIKAGSDSKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPATVKAGDIMVSGDIKVMNPDHVICHLDDGATLNMELVADTGKGYVPATANRPADAPIGLIPVDSLYSPVRQVAYKVDNARIGQELDYDKLSLTVDTDGTVTPEDAVAYAARILQDQLQVFVHFEEAMNDSGLIGMAAPSASTEESDVNQLNRFLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG*