ggKbase home page

scnpilot_solids1_trim150_scaffold_16145_curated_2

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 285..1277

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 330.0
  • Bit_score: 648
  • Evalue 5.40e-183
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 324.0
  • Bit_score: 578
  • Evalue 1.20e-162
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHJ4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 330.0
  • Bit_score: 648
  • Evalue 3.80e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
GTGACCGATCTTTCCCCCGACCTGCCTCGGGATCCCCGCCACGATCCGGTCCTCCGCGAAGAAGTCATCGCCGCCCTCGCCATCGCTCCGGGCGAGCGGCATGTCGACGCGACCTTCGGGGCCGGCGGCTACACGCGTGCGATGCTCGCCGCGGGGGCCGAGGTGATCGCGTGCGACCGCGACCCCGACGCGATTGCCGAGGGGCAGGCGCTCGTCGCCGAAGCCGACGGCAAGCTGATGCTGATCCACGGCCGTTTCGGCGAAATCGACCGCCTGCTCGCCGAACGGGGCATCGACGCGGTCGACGGCATCACCTTCGACATCGGCGTTTCGTCAATGCAGCTCGACCGCGATGCGCGCGGCTTCTCGTTCCAGAAGGACGGCCCGCTCGACATGCGCATGGCGCAGGAGGGCGAGACTGCCGCCGAATGGCTCAATCGCGCCGACGAGGCCGAGATCGCCGACGTGCTGTATCATTATGGCGACGAACGTCAGTCGCGCCGCGTCGCGCGGGCAATCGTCGCTGCGCGCCCGCTGTCGCGCACCGGCGAACTGGCGACGGTGATCCGCAAGGCGCTGCGCCATCCGCCGGGCGCGCCCAAGGATCCGGCGACGAAGAGCTTTCAGGCGATCCGCATCCACATCAACGGCGAGCTCGACGAACTGATGGAGGGGCTCGCCGCGGCAGAGCGCATCCTGCGCCCCGGCGGCCGGCTTGCGGTGGTCAGCTTCCACAGCACCGAAGACCGGATCGTGAAGAACTTTCTGCGCGAGCGTAGCGGCGGTGACGCCGCCGGCTCGCGCCACCGGCCCGCGCCGATCGGAGCGGCGCGGGCCGCCACCTTTCAGCCGCCGGCGCGCAAGGTGCGCCCCGGCAAGGCCGAAGAGGCGCGCAACCCGCGCGCGCGCTCCGCGACGCTGCGCAGCGCGGTGCGCACCGCAGCCCCGGCCTGGCCGACCCAATTGACGACGAAGGAGGCAATCTCATGCTGA
PROTEIN sequence
Length: 331
VTDLSPDLPRDPRHDPVLREEVIAALAIAPGERHVDATFGAGGYTRAMLAAGAEVIACDRDPDAIAEGQALVAEADGKLMLIHGRFGEIDRLLAERGIDAVDGITFDIGVSSMQLDRDARGFSFQKDGPLDMRMAQEGETAAEWLNRADEAEIADVLYHYGDERQSRRVARAIVAARPLSRTGELATVIRKALRHPPGAPKDPATKSFQAIRIHINGELDELMEGLAAAERILRPGGRLAVVSFHSTEDRIVKNFLRERSGGDAAGSRHRPAPIGAARAATFQPPARKVRPGKAEEARNPRARSATLRSAVRTAAPAWPTQLTTKEAISC*