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scnpilot_solids1_trim150_scaffold_9094_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(614..1216)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 193.0
  • Bit_score: 353
  • Evalue 3.70e-95
3-isopropylmalate dehydratase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDH8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 198.0
  • Bit_score: 366
  • Evalue 1.80e-98
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 196.0
  • Bit_score: 374
  • Evalue 1.20e-100

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Taxonomy

BJP_08E140C01_10KDA_Sphingopyxis_64_55 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACTCCGCTGGACAAGGTCGAGGGCCGTGCGATTCCGCTGGGGCTCAAGAATGTCGATACCGACGTCATCATCCCGGCGCACTGGCTGAAGACCACCAGCCGCGAGGGCATGGGGCGCGGCGCGTTCGAGACGCTGCGCGCCGACCCCGACAATCTGTTCGACCGCCCCGAATACAAGGGCGCGCCGATCCTGATCGCCGGCGACAATTTCGGATGCGGGTCGAGCCGCGAGCATGCCGCCTGGGCGCTGGGCGATCTGGGCATCCGCGTCGTCATCGCGCCTTCCTATTCGGACATCTTCTCGGGCAATGCGGTCAAGAACGGCATCCTTCCGGTCGTGCTGCCGCAGCCGGCGATCGATCGGCTGATGGAGGTCGCCGCGACCGACCCGGTGCACGTCGACCTCGACACGCAGACGGTGACGACGCCCTTCCAGGACCGCTTTTCCTTCGACATCGACCCGTTCCGCAAGATGTGCCTGCTCCACGGTCTCGACGAAATCTCGTTGACCGAAAAGAGCGGCGCCGCGATCGATATCTATGAGCAAAGACTGGACGAAGATCGTCCGTGGCTGCGTCCCGCGACGATCGACGCCCGATAA
PROTEIN sequence
Length: 201
MTPLDKVEGRAIPLGLKNVDTDVIIPAHWLKTTSREGMGRGAFETLRADPDNLFDRPEYKGAPILIAGDNFGCGSSREHAAWALGDLGIRVVIAPSYSDIFSGNAVKNGILPVVLPQPAIDRLMEVAATDPVHVDLDTQTVTTPFQDRFSFDIDPFRKMCLLHGLDEISLTEKSGAAIDIYEQRLDEDRPWLRPATIDAR*