ggKbase home page

scnpilot_solids1_trim150_scaffold_15638_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..657

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQ41_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 205.0
  • Bit_score: 209
  • Evalue 3.90e-51
TetR family transcriptional regulator {ECO:0000313|EMBL:AJA11569.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 226
  • Evalue 4.40e-56
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 209.0
  • Bit_score: 147
  • Evalue 4.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GCCGATGCGGCCGCGCAGGGAGCGATGGAGATACGGGGAGCAATGGCGATACCAAGGCAGGACGCGGCCGGACGGCCCCGCCGATCGACGCGCGAGCGGCTGCTCGACACGGCGGGCGAGTTGCTGGCCGAGGTCGGGATGGACCGCATCTCGACCAATTTGATCTGCGAGCGCGCCGGGCTCACGCCGCCGGCGCTTTATTATTACTTCGCCGACAAGTTCGAGGTGATCGTCGCGCTCGGCGAGCGCCTGATGGATCGCCAGAATGCGGCGCTGGTCCGCTGGCTCGACCGCTACGCGAGCGCGGGCATTCACGCCTATGCCGAGAATAACGAGGAACTGCTCCGCGAGACGGCGGAGATCACCGAGGCCGAACCGGGGGGCGTCTGGATCGAACGCGCGCTGCATTCGAGCCCACGGCTCGAACATGTCCGCATCAAATCGCACCGCTATGTCACCGACCGGCTGACCGACGGCTTCCAGCCGTTCCTGCCCGACCGAACCCGCGACGAAGTCTGGCTGCGCATGCGCATGCTCGTCGAGTTCGGCTATGTCGCGACCGAATTGCTCCACGCCGAAAGCGGAATCGCGCGCGACGCCATCCTCGCCGAAACGGCGCGGATGCAGAGGCTCGTCATTCTCGACCTCGTCGACTGA
PROTEIN sequence
Length: 219
ADAAAQGAMEIRGAMAIPRQDAAGRPRRSTRERLLDTAGELLAEVGMDRISTNLICERAGLTPPALYYYFADKFEVIVALGERLMDRQNAALVRWLDRYASAGIHAYAENNEELLRETAEITEAEPGGVWIERALHSSPRLEHVRIKSHRYVTDRLTDGFQPFLPDRTRDEVWLRMRMLVEFGYVATELLHAESGIARDAILAETARMQRLVILDLVD*