ggKbase home page

scnpilot_solids1_trim150_scaffold_15797_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2..1780)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVY5_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 583.0
  • Bit_score: 877
  • Evalue 7.00e-252
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AJA08252.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 583.0
  • Bit_score: 925
  • Evalue 5.30e-266
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 583.0
  • Bit_score: 877
  • Evalue 2.20e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1779
ATGATCCCTTCCAGCAGGAATGATACGACCTTGGGGGCGAAACGCATCATCACACGGCCGGCCACCGGCGAAGCGTCCGCGGATGTGTCGCTGTTCGATTCGCCCGACTTCGTGGCGCGGCTGATGCGGGTCGCGCAGCTCTGGCACTATGTGCTGATCGCGCGTTCGCTCGGCTTCTTCGCCTTCGCCTTCTTTCCCGGCCCGTCGCCCTTTCTGGCGTCGCCGCTGCATTGGGCGCCGATGGCGGCGGGATTGCTGTGCGACCTTGCGTTGACGGTGATCGGTCAGGTCGCACGCGGCCGCCGGGTCGCGGCGCTGCCCGACCCGCGGCTGACCGTCCCGCTGTGTCTGGGCCTGCTTGCCGCAGGAAGCCTGCTCACCTCCGCATCGACCTTTGCCGAGATTGCGGCGCCCGATCGCGCCGGCTGGTTCGACGCCGTCCTGGCGATCCAGGCGGGCTCGATCCTCGTCGCCGCCTCGGCCGCGGCGATCGCGCGGCCCGCTTTCTTCGCCTTCGCCGGCGCCAGCGCGCTCGGCGGCGCGCTCGGCGCCGCGTCGTGGCCCTTCGCGATCGCGGGCCTCGTCTTTCTAGGTCTGCTCATCGTGATGATGCGCGAGGATATCCGGCACCAGCGCCGCGCGACGCGCGCGGCGCGCCTGACGGTCAGCGAACAGCAGCGCGCGCTGGGCCTCGTGCGCGATTTCGAAAGGGCGGGGCGCGGCTGGTTCTGGGAAACCGACCGCCACGGCCAGCTCGTCTATATCTCGCCGACGGTCGCGGCGAAGCTCGGCCGGCCGCTCGGCGACCTGCTCGGCCGGCCGTTCACCGACATCATTCGCCGCCGGCTCGGCAACGATGAAAGCGAAGAACGCACGCTAGGCTTCAGCCTGTCGTCGCGCACGCCGTTCAAGGAACTGACGGTGCAGGCGGCGGTGCCGGGCGAGGAGCGCTGGTGGTCGATCTCGGGCAATCCGATCAGCAACGAGCTCGGCAATTTCCAGGGGTTCCGCGGCAGCGGCACCGACCTGACCGAGATGAAGCGGTCGGAGCGCGAGATCAACCAGCTTGCGCGCTACGATACGCTCACCGGGCTAGCCAACCGGCGGCATATCGCCGACCTGCTCGAACGCGCGCTCCGCAATCACGTCGGCCAGCCTCAGCCCTGCGCGCTGCTGCTGATGGACCTCGATCGTTTCAAGGCGGTCAACGACACGCTGGGCCATCCGGTCGGCGATCAGCTTCTGCAGCAGGTGGCGGGGCGGCTGACCCAGATCGTCGGCGACAGGGGGCAGGTCGGCCGTCTGGGCGGCGACGAGTTCCAGATCGTGCTGCCGCAGATGGTCCAGCCCGAAAAGCTCGCCGGCATCGCCAACGCGATCATCCTCAGCCTCGCCAAGCCCTTCGCCATCGAGGGCGAGCAGGTGCGCATCGGATCGTCGATCGGCATCGCGGTGTCGGAAGGGCGGGGCATTTCCGCCTCGTCGCTCGTCCGCAACGCCGACCTTGCGCTCTATGCCGCGAAGGACGCGGGGCGCGGCGTCTATCGTTTCTATGCCGACGCGATGCACGATCAGGCGAGCGAGCGGAAAGCGATCGAGGATTCGCTGCGCGAGGCGCTGGCGCGCGACGAACTGGCGCTGTTCTATCAGCCGATCGTCGACGTGAAGAGCGAGCGCATCTCGGGCTTCGAGGCGCTGATCCGCTGGCGCCGCGACACGGGAAATGTCGTCAGCCCGTCGAAATTCATCCCCATCGCCGAGGATTCGAACCTGATCGTC
PROTEIN sequence
Length: 593
MIPSSRNDTTLGAKRIITRPATGEASADVSLFDSPDFVARLMRVAQLWHYVLIARSLGFFAFAFFPGPSPFLASPLHWAPMAAGLLCDLALTVIGQVARGRRVAALPDPRLTVPLCLGLLAAGSLLTSASTFAEIAAPDRAGWFDAVLAIQAGSILVAASAAAIARPAFFAFAGASALGGALGAASWPFAIAGLVFLGLLIVMMREDIRHQRRATRAARLTVSEQQRALGLVRDFERAGRGWFWETDRHGQLVYISPTVAAKLGRPLGDLLGRPFTDIIRRRLGNDESEERTLGFSLSSRTPFKELTVQAAVPGEERWWSISGNPISNELGNFQGFRGSGTDLTEMKRSEREINQLARYDTLTGLANRRHIADLLERALRNHVGQPQPCALLLMDLDRFKAVNDTLGHPVGDQLLQQVAGRLTQIVGDRGQVGRLGGDEFQIVLPQMVQPEKLAGIANAIILSLAKPFAIEGEQVRIGSSIGIAVSEGRGISASSLVRNADLALYAAKDAGRGVYRFYADAMHDQASERKAIEDSLREALARDELALFYQPIVDVKSERISGFEALIRWRRDTGNVVSPSKFIPIAEDSNLIV