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scnpilot_solids1_trim150_scaffold_37473_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2..850

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTN3_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 283.0
  • Bit_score: 493
  • Evalue 1.40e-136
two component, sigma54 specific, Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 283.0
  • Bit_score: 493
  • Evalue 4.20e-137
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 283.0
  • Bit_score: 495
  • Evalue 5.00e-137

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATCGCCGAGCGCAACGCATGGCTGGCCGAGAACCGCCCCGACCTCATCATCACCGACGTGGTGCTGCCCGATGGCGACGGCATCGATTCGCTGCCCGGCGCCGGGGTCGACCCGCTGACGCCGGTGATCGTGCTGTCGGCGCGCAACACGCTCGACACTGCGGTGCGCGCGACGGGGATCGGCAGCTACGACTATCTGCCCAAGCCTTTCGATCTCGACGAACTGACCGCCAGCGTGCGCGCCGCGCTCCAGCGGCGCGTGCTGCCCAGCGAGCGCGTCGAGCCGGCGACCGACGACAGCCACGGCCTCGTCGGCCGCGCCCCGGCGATGCAGGCGGTCTATCGCACCATCGCGCGGCTCGCGACCAACGACCTCGCCGTGCTGATCCTCGGCGAATCCGGGACCGGCAAGGAGGTCGTCGCGCGCGCGATCCATGCCACCGGGCTGCGGCGCAAGGGCCCGTTCGTCGCGATCAACATGGCGGCGATCCCGCGCGAGCTGATCGAGGCCGATCTGTTCGGCCACGAAAAGGGCGCCTTCACCGGCGCGACCAGCCGCAGCGCCGGGCGGTTCGAGCAAGCGGCGGGCGGCACGTTGTTCCTCGACGAGATCGGCGACATGCCGATCGAGGCGCAGACGCGGCTGTTGCGCGTCCTCCAGACGAGCGAATATTCAACTGTCGGCGGCAGCCAGGCGCTTCGGGCCGATGTGCGCGTCGTCGCCGCGACCCACCGCGACATGCGCGCGCTCGTCGCCGACGGACGGTTCCGCGAGGATTTGTTCTACCGGCTCAATGTCATCCCGGTGACCCTGCCGCCGCTGCGCGAACGGCGCAGCGACATCGCCGCG
PROTEIN sequence
Length: 283
IAERNAWLAENRPDLIITDVVLPDGDGIDSLPGAGVDPLTPVIVLSARNTLDTAVRATGIGSYDYLPKPFDLDELTASVRAALQRRVLPSERVEPATDDSHGLVGRAPAMQAVYRTIARLATNDLAVLILGESGTGKEVVARAIHATGLRRKGPFVAINMAAIPRELIEADLFGHEKGAFTGATSRSAGRFEQAAGGTLFLDEIGDMPIEAQTRLLRVLQTSEYSTVGGSQALRADVRVVAATHRDMRALVADGRFREDLFYRLNVIPVTLPPLRERRSDIAA