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scnpilot_solids1_trim150_scaffold_18645_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1403..1771)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4S3_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 119.0
  • Bit_score: 147
  • Evalue 7.90e-33
anti-FecI sigma factor FecR; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 119.0
  • Bit_score: 147
  • Evalue 2.50e-33
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ABQ67289.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 119.0
  • Bit_score: 147
  • Evalue 1.10e-32

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GAGGTCTGGGCCGATGGCGCGGAGGGCCATCGCGTCCGATTGAAGGCCGGGTCGCGCGGCTTCGTCGCCGACGATGCCGCGATCGAGCAGGCCCCGGCCGCACCGTCCGCGATCGACCGTGCGCTTGCATGGCGCAACGGCAAGGTCGACCTCGCCGGCGACCGGCTCGACAGCGCGGTGGCCGAGTTCAACCGCTACAATCGTCGCCAGCTGGTCGTCGCCGATCCCGCCGTCGCGGCGGAGCGGTTCGACGGCGTGTTCCGCACCGACGATCCCGAAGGGTTCGCGCAGGCGGTCGAGGTCAGCCTGGGGGTGCCCGTCGACCTGTCCGATCCCGCGCAGATCCGCATCGGCCGGCCCGGTCTTTGA
PROTEIN sequence
Length: 123
EVWADGAEGHRVRLKAGSRGFVADDAAIEQAPAAPSAIDRALAWRNGKVDLAGDRLDSAVAEFNRYNRRQLVVADPAVAAERFDGVFRTDDPEGFAQAVEVSLGVPVDLSDPAQIRIGRPGL*