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scnpilot_solids1_trim150_scaffold_23332_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..483

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 296
  • Evalue 1.90e-77
tRNA-dihydrouridine synthase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTN1_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 296
  • Evalue 1.40e-77
dihydrouridine synthase TIM-barrel protein nifR3 similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 296
  • Evalue 4.30e-78

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ACCGTCCACGGCCGCACGCGCAACCAGATGTACAAGGGCACCGCCGACTGGAGCTTCGTCCGCAAGGTCAAGGATGCGGTGTCGGTCCCCGTTATCGTCAACGGCGACATCTGTTCGGTCGCCGACGCGCGCGCGGCGCTAGCGCAGAGCGGCGCCGACGGGGTGATGATCGGCCGCGGCGCCTATGGCCGCCCGTGGCTGCTCGGCCAGGTGATGACGGCGCTGCGCGGCGAGGGCGAGCGCTCTGATCCCGGCATCGACGAACAATATGCCGTCATTACATCGCACTATCGCGCGATGCTCGACCATTATGGCGAGACGACGGGTGTCAATATCGCGCGCAAGCACCTCGGCTGGTATGTCAAGGGGCTGCCCGGTTCGGCCGAGTTCCGCAACAAGGTCAATCAGATTCCCGACAGCCGCGGCGTCCTCGACGCGCTCGCCGCCTTCTATGGCCCCTTCCTCAGCAAGGCGGCGGCGTGA
PROTEIN sequence
Length: 161
TVHGRTRNQMYKGTADWSFVRKVKDAVSVPVIVNGDICSVADARAALAQSGADGVMIGRGAYGRPWLLGQVMTALRGEGERSDPGIDEQYAVITSHYRAMLDHYGETTGVNIARKHLGWYVKGLPGSAEFRNKVNQIPDSRGVLDALAAFYGPFLSKAAA*