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scnpilot_solids1_trim150_scaffold_8793_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1146..2048

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 300.0
  • Bit_score: 572
  • Evalue 1.90e-160
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 300.0
  • Bit_score: 577
  • Evalue 1.40e-161
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 300.0
  • Bit_score: 572
  • Evalue 5.90e-161

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGCGAATAAAAGCAACGTTCCGGCTGTGGTGCCCGCGCTCGGCGGTGAGGCGAGCCTGAACCGCTATCTGGCCGAAATCCGCAAATTCCCCCTATTGACGCCCGAGCAGGAATATATGCTCGCCAAGCGGTTCCAGGAACATGACGACAACGAGGCCGCGGCACAGCTCGTGACTTCGCACCTGCGCCTCGTCGCCAAGATCGCGATGGGCTATCGCGGCTATGGCCTGCCGGTCAGCGAGCTGATCAGCGAGGGCAATATCGGCCTGATGCAGGGGGTGAAGAAATTCGACCCCGACCGCGGCTTCCGCCTCGCCACCTATGCGATGTGGTGGATTCGCGCCTCGATCCAGGAATTCATCCTGCGGTCGTGGAGCCTCGTGAAGATGGGCACCACCGCGGCGCAGAAGAAGCTGTTCTTCAACCTCCGCCGGATGAAGAACAACCTCGAGGCGTTCGAGGACGGCGACCTGAGCCCCGAGCATGTCGCGAAGATCGCGACCGACCTCGGCGTGACCGAGGACGAGGTGGTCAGCATGAACCGCCGCATGGCGATGGGCGGCGACACGTCGCTCAACGTCCCGATGGGCGAGGACGGTGACAGCCAGTGGCAGGATCTGCTCGGCGACGAAGGCCCGCTGCAGGACGAGCGCGTCGCCGAGGCGGAGGAACGCGACGTGCGCCACGCGCTGCTCAGCGAAGCGCTCGAAACGCTGAACGACCGCGAACGCCACATCCTGACCGAACGCCGCCTGACCGACGATCCCAAGACGCTTGAGGACCTGAGCCAGGTCTACGACGTCAGCCGCGAGCGCGTCCGTCAGATCGAGGTGCGCGCGTTCGAAAAGCTGCAGAAGGCGATGCTGAAGCTCGCCGGCGAACGGCGGCTGATCGCGACCTGA
PROTEIN sequence
Length: 301
MANKSNVPAVVPALGGEASLNRYLAEIRKFPLLTPEQEYMLAKRFQEHDDNEAAAQLVTSHLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPDRGFRLATYAMWWIRASIQEFILRSWSLVKMGTTAAQKKLFFNLRRMKNNLEAFEDGDLSPEHVAKIATDLGVTEDEVVSMNRRMAMGGDTSLNVPMGEDGDSQWQDLLGDEGPLQDERVAEAEERDVRHALLSEALETLNDRERHILTERRLTDDPKTLEDLSQVYDVSRERVRQIEVRAFEKLQKAMLKLAGERRLIAT*