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scnpilot_solids1_trim150_scaffold_8254_curated_3

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 553..1098

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RIMP_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 1.80e-89
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 183.0
  • Bit_score: 338
  • Evalue 6.60e-90
hypothetical protein; K09748 ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 336
  • Evalue 5.60e-90

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGGTCGATTTCGACGCCCTCAACGCGATCATCGCGCCCGAAGCCGAGGCGATGGGCCTCGCGCTGGTGCGCGTCGCCTTCTTCGGGGGCGATAGCGACCCGACGCTGCAGGTGATGGCCGAGCGGCCCGACACGCGCCAGCTCACCATTGATGACTGCGCTGACCTGTCGCGCCGCATTTCCGACCGGCTCGACGCGCTGGAAGAAGCGGGGAAGGACCCGATCGACGGCGCCTATCGGCTCGAGGTCTCGTCGCCCGGCATCGACCGGCCGCTGACGCGACCCGCCGACTTCGCCGACTGGGCGGGGCACGAAGCGAAGATCGCGCTCAAGGAAAAGCGCGACGGGCGCCAGCGCTTCAACGGTACGCTGATCGGCATCGACGGCGATGTCGTGACGATAGTGGACAAGGAAGAGATCGAGCATCGCCTGCCGTTCGACGCGATCGACACGGCGAAGCTGGTACTCACCGACAGATTGATTGCCGCAACCGTTCCGCTCTCGACCGAGGGCGCCGACGAAATGGAAGAAGAAGGACAGGACTGA
PROTEIN sequence
Length: 182
LVDFDALNAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDALEEAGKDPIDGAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKRDGRQRFNGTLIGIDGDVVTIVDKEEIEHRLPFDAIDTAKLVLTDRLIAATVPLSTEGADEMEEEGQD*