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scnpilot_solids1_trim150_scaffold_8374_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1..828)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9K0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 491
  • Evalue 5.00e-136
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:AJA08653.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 276.0
  • Bit_score: 492
  • Evalue 4.10e-136
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 276.0
  • Bit_score: 487
  • Evalue 3.00e-135

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGCGCTTGATATTTTGATCGTCGACGACGAACGCGACATCTGCGAGCTGGTGGCCGGGGTCATGGAGGACGAGGGCTATGAGGCGCGCACCGCGTCGGACAGCGACGCCGCGCTCGAAGCCGTCCGCCAGCGCCGCCCGTCGCTCGCGCTGATCGACGTCTGGCTCCAGGGATCACGGCTCGACGGGCTCGGGCTGGTCGAGGCGATCAAGGCGTTCGACCCGACGCTGCCGATCATCGTGATTTCGGGCCATGGCGGGCTCGATACCGCGGTGGCGGCGATCCGCCGCGGTGCCTTCGATTTCATCGAAAAGCCGTTCGAGGCCGAGCGCCTGCTGCATCTTGTCGCGCGCGCCACCGAAAGCGAGCGGCTGAAGTTCGAATATGAGCAGCTTCGCGAAAAGGCTGGCCCGGCCGACGAACTGACCGGCACCAGCGCCGCGATCAACAATGTCCGTGCGACGCTGAAGCGCGTGGCGGGGACCGGCAGCCGCGTCCTCATCACCGGCGCGCCGGGAGTGGGGAAGGAGGTTGCCGCGCGCGTCCTGCACGGCTGGAGCGGGCGGCAGACCGCGCCCTTCCGCGTGATTTCGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACCGAATCGGACGATGGCTCGATCCGTGTCGGCCTGCTCGAACAGGCGCACGGTGGCACTCTGTTCCTCGACGAGGTCGCCGACATGCCGCTGACCACGCAGGGCAAGATCCTGCGCGTGCTGACCGACCAGAGCTTCAACCGCGTCGGCGGACGCACGATGATCCGCGTCGATGTCCGCATCATTTCG
PROTEIN sequence
Length: 276
MALDILIVDDERDICELVAGVMEDEGYEARTASDSDAALEAVRQRRPSLALIDVWLQGSRLDGLGLVEAIKAFDPTLPIIVISGHGGLDTAVAAIRRGAFDFIEKPFEAERLLHLVARATESERLKFEYEQLREKAGPADELTGTSAAINNVRATLKRVAGTGSRVLITGAPGVGKEVAARVLHGWSGRQTAPFRVISSXXXXXXXXXXXXXXTESDDGSIRVGLLEQAHGGTLFLDEVADMPLTTQGKILRVLTDQSFNRVGGRTMIRVDVRIIS