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scnpilot_solids1_trim150_scaffold_5884_curated_5

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2759..4018)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 419.0
  • Bit_score: 775
  • Evalue 6.40e-222
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 419.0
  • Bit_score: 775
  • Evalue 2.80e-221
Diaminopimelate decarboxylase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWP5_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 419.0
  • Bit_score: 775
  • Evalue 2.00e-221

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGACCATTTTCAATATCGTGACGGCGTCCTCCACGCCGAGGAAATTCCCCTGCCGCGCATCGCCGAGGAGATCGGCACCCCCGTCTATGTCTATTCGCGCGCGACGCTCGAGCGCCATGCGCAGGTGTTCCGCGACGCGTTGAAGGACGTGCCGAAGAAGCACATCGCCTTCGCGATCAAGTGCAACCCCAACCTCGGCGTGCTGCGCGTCCTCGCGCGGCAGGGCTATGGCGCCGACGTCGTGTCGGGCGGCGAGCTCGAACGCGCGATCGCCGCGGGCATGGCGGCGGAGGACATCGTCTTTTCGGGCGTCGGCAAGACGCGCGCCGAGCTGGCGCTCGGGCTCGACCGCGGGATCGGCCAGTTCAACATCGAGCATGAAGCCGAAGGCGTCGCGCTGGCCCAGATCGCGCTGGCGAAGGAAATGACCGCGCGCGCGGTGCTGCGCGTCAACCCCGACGTCGACGCCGGCACCCACGCCAAGATTTCGACCGGCAAGGCCGAGAACAAGTTCGGCGTCGGCATCGACGTCGCGCCGGAGATATTCGGCCGACTCGCGGGCCTTCCGGGGCTTCAGATGCGCGGTATCGCGCTCCACATCGGCAGCCAGCTCACCAGCCTCGACCCGCTCGAAGCGGCGTTCGAGCGCGCCGGCCGCCTTGTTGCCGACCTGCGCGCGGCGGGGCACAGCATCACCCACGTCGACCTCGGCGGCGGTCTCGGCGTGCCCTATCGCCCCGACGACAATCCGCCGAGCCCGGCCGAATATGGCGCGATGGTCGCGCGCGTAACCAAGGACTGGGACGTCACCCTGCTGTTCGAGCCCGGCCGCGTGATTGCGGGCAACACCGGCGTGCTGCTGACCGAGGTGCTGTGGGTCAAGCCCGGCGCGACCAATCCCTTCGTGATCGTCGATGCCGCGATGAACGACCTTGCACGCCCGGCGCTCTACGATGCGTATCATGATTTCGTCGCGGTGAAGCCGACCGGGGACAAGATGACCGCGTCGATCGTCGGCCCGGTGTGCGAGACCGGCGACACCTTCGCGCGCGACCGGTTGGTCGACGCGGTGGAGGCGGGCGACCTCGCCGTCTTCCGCACCGCGGGCGCCTATGGCGCGACGATGGCCTCGACATACAACAGCCGCAGCCTCGTGCCCGAGGTGCTGGTGGACGGCGACCGCTACATCGTCGTCGCCGACCGCATCGCCGCAGGGACGATCATGGCCGCCGAGCGCGTGCCGGACTGGATCGACTGA
PROTEIN sequence
Length: 420
MDHFQYRDGVLHAEEIPLPRIAEEIGTPVYVYSRATLERHAQVFRDALKDVPKKHIAFAIKCNPNLGVLRVLARQGYGADVVSGGELERAIAAGMAAEDIVFSGVGKTRAELALGLDRGIGQFNIEHEAEGVALAQIALAKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAPEIFGRLAGLPGLQMRGIALHIGSQLTSLDPLEAAFERAGRLVADLRAAGHSITHVDLGGGLGVPYRPDDNPPSPAEYGAMVARVTKDWDVTLLFEPGRVIAGNTGVLLTEVLWVKPGATNPFVIVDAAMNDLARPALYDAYHDFVAVKPTGDKMTASIVGPVCETGDTFARDRLVDAVEAGDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYIVVADRIAAGTIMAAERVPDWID*