ggKbase home page

scnpilot_solids1_trim150_scaffold_16412_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(709..1644)

Top 3 Functional Annotations

Value Algorithm Source
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 311.0
  • Bit_score: 596
  • Evalue 1.80e-167
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 311.0
  • Bit_score: 577
  • Evalue 1.90e-162
Thymidylate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8M5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 311.0
  • Bit_score: 587
  • Evalue 7.60e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
TTGCCCGATTCCATCCATTATGAACTGCAATATCTCGACCTGATGCGCCGAATCTGGGTCGAAGGCGACGAGCGGGTCGACCGCACCGGCGTCGGCACGCGCTCGCTGTTCGGCGAGACGATGCGATTCTCGCTCGCCGACGATGCGATCCCGCTGCTCACCACCAAGCGGGTCTATTGGAAAACCGCGCTGCGCGAGATGCTGTGGTTCCTGACCGGCGACACCAACATCCGCCCGCTGGTCGCGCAGGGGGTGCGGATCTGGACCGACTGGCCGCTCGATCGCTATCGCCGCGAGACCGGCGAAGATATCGGCGCGGAGGATTTCGAAGCGCGCATCCTTTCGGATTCCGATTTCGCGGCGGCGTGGGGCGACCTCGGTCCCGTCTACGGCCATCAATGGGTGAACTGGCCGCGCTACGAGCCCGCGGGGGATGGTCTGTTCCGCCGGGCCGAAAAGGGGCACGACCAGATTGCGGCGCTGATCGATTCGCTGCGCAGCAATCCCGGGTCGCGGCGGCACATCTTCACCGGCTGGAACGTCGCCGACCTCGATCGCATGGCCTTGCCGCCGTGCCACATGACCTATCAGTTCCATGTGCGCAGCGACGGCGGATTATCGTGCCTGCTGTTCCAGCGCTCGTGCGACCTGGGGCTCGGCTTCGCGTTCAACATATTCGAGGCGGCGCTGCTGACGCGGATGATCGCGCAGCAATGCGACCTGCACGCGCACGAACTGGTGTGGACCGGCGGCGACGTGCATCTCTATCTCAACCACGCCGCACTCGTCGAAGAGCAGTTACGGCGGACCCCGGCCGGCGCGCCGAAGCTGCGCATCCTGCGGCGGCCGGAAAGCATCTTCGCCTATCGCTTCGAGGATTTCGCGGTCGAGGCCTATGCGCCGCAGGCGCATATTCCGGCGCCCGTCGCGGTCTGA
PROTEIN sequence
Length: 312
LPDSIHYELQYLDLMRRIWVEGDERVDRTGVGTRSLFGETMRFSLADDAIPLLTTKRVYWKTALREMLWFLTGDTNIRPLVAQGVRIWTDWPLDRYRRETGEDIGAEDFEARILSDSDFAAAWGDLGPVYGHQWVNWPRYEPAGDGLFRRAEKGHDQIAALIDSLRSNPGSRRHIFTGWNVADLDRMALPPCHMTYQFHVRSDGGLSCLLFQRSCDLGLGFAFNIFEAALLTRMIAQQCDLHAHELVWTGGDVHLYLNHAALVEEQLRRTPAGAPKLRILRRPESIFAYRFEDFAVEAYAPQAHIPAPVAV*