ggKbase home page

scnpilot_solids1_trim150_scaffold_25554_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(367..1476)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 369.0
  • Bit_score: 359
  • Evalue 4.30e-96
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EK52_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 369.0
  • Bit_score: 359
  • Evalue 3.00e-96
two component sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 344.0
  • Bit_score: 271
  • Evalue 3.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GCCGTAGCGCGGATGAACGATATGTGGCATCCGCGCCTGCGCATTACGCGGCACGACGCCCCGCCGGCGGTAGGCGGGGGCGCGGTGTCGGCCGACCGCGAGATCGCCCGGCGGGTGATCGCGTCGCAGCCCCGCTTGGCGCCGCTCGACCTCCACGCCGTGCGCGACGGCGACGCGCTCCACGGCACGATCCGGCTGAGCCATGGCGGCTGGCTGAGCTTCCGGTCCGAAGATTATTTTCAGGGCTATCCCTATTTCTACCATTATACCGCGTCGGTGCTGTCGCTGCTCGTCAGCGTGGTGCTGCTGGCGCTGCTGTTCGGCCGGATGATCGGGCGACCGCTGGCCGATATCGCGGCGGCGGCCGAGCATGTCGGGCGCGACGCCCCGGTTGCCATCGCCGCCACCGGCCCGCGCGAGGTGCGCCAGGTGGCCGCCGCCTTCGACCGCATGCAGGCGCGGCTGCTCGACCATGTCGGCGAGCGCGTCCAGTCGCTCGCGGCGATGTCGCACGACCTGCGGACGCCGCTCGCCCGGCTGCGGCTCAACGCCTCGGCGGTCGACGATGCGGAGACCCGCGCCGCGCTGGATCAGGACATTGTCGAGATGGAGGCGTTCGTCACCTCCGTGCTCGATTATCTGCGCGGCGACGAGCCCGAGCAGGAACAGTGGGCCGACCTGGCGTCGATCGTGATGACGGTGGTGGACGAGGCGCGCGATGCCGGCGGCGCGGTAAGCTATGACGGGCCGGACCGGCTGGAAGGCGTCACCCGGCCGCTGAAATTGAAACGCCTGTTGCGCAACATCGTCCAGAACGGGGTGCGCCATGCCGGGCCGACGCGGGTCCGCCTGATCCACGATGCGAATCGGATCGTCATCGGGGTGGATGACGACGGCCCCGGCATCCCCGAAGACAAGCTCGACGCCGTGCTGAAACCCTTTACGCGGCTGGAGACATCGCGCAGCCGGAGCACGGGCGGAGCGGGTCTCGGCCTTGCCATAGCGCACCAGCTTTCTCAGCGGCTTGGCGGTGAGATTGCCCTGTCCAACCGCTCCGGCGGCGGCCTTTCAGTCACCATGTGGCTGCCGTTCGCGCCGCGGCAAAGTTGA
PROTEIN sequence
Length: 370
AVARMNDMWHPRLRITRHDAPPAVGGGAVSADREIARRVIASQPRLAPLDLHAVRDGDALHGTIRLSHGGWLSFRSEDYFQGYPYFYHYTASVLSLLVSVVLLALLFGRMIGRPLADIAAAAEHVGRDAPVAIAATGPREVRQVAAAFDRMQARLLDHVGERVQSLAAMSHDLRTPLARLRLNASAVDDAETRAALDQDIVEMEAFVTSVLDYLRGDEPEQEQWADLASIVMTVVDEARDAGGAVSYDGPDRLEGVTRPLKLKRLLRNIVQNGVRHAGPTRVRLIHDANRIVIGVDDDGPGIPEDKLDAVLKPFTRLETSRSRSTGGAGLGLAIAHQLSQRLGGEIALSNRSGGGLSVTMWLPFAPRQS*