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scnpilot_solids1_trim150_scaffold_27053_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..405

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9K0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 134.0
  • Bit_score: 246
  • Evalue 1.40e-62
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:KGB57201.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 134.0
  • Bit_score: 250
  • Evalue 1.30e-63
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 134.0
  • Bit_score: 242
  • Evalue 6.20e-62

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
CGCTACGCCGCCGACCGCCGCGTCCCGCCGCCGGAGATCAGCGCAGAGGCGATGGCGGCGCTCCAGGCGCACGACTGGCCGGGCAATGTGCGCGAACTGCGCAACGTGATCGAACGCGTGATGATCCTCGCGCCCAGCGACCGGCTGGCGCGGATCGACGCCGACATGCTGCCGGCCGAGCTGATGCGGGGCGGCACCGATATCCTGCCGCACGCCGAATCGATCACCGCGATCCCGCTCAAGGAAGCGCGCGAGAATTTCGAGCGCGAATATCTGCGCATCCAGATCAACCGGTTCTCGGGCAATATCTCGCGCACCGCGACCTTCATCGGCATGGAACGCTCCGCGCTGCACCGCAAACTCAAGCTGCTGGGCCTCACCGAGCATCCCGACGGCGACGGCTAG
PROTEIN sequence
Length: 135
RYAADRRVPPPEISAEAMAALQAHDWPGNVRELRNVIERVMILAPSDRLARIDADMLPAELMRGGTDILPHAESITAIPLKEARENFEREYLRIQINRFSGNISRTATFIGMERSALHRKLKLLGLTEHPDGDG*