ggKbase home page

scnpilot_solids1_trim150_scaffold_11451_e1244_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..981

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWD6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 330.0
  • Bit_score: 446
  • Evalue 2.90e-122
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 330.0
  • Bit_score: 446
  • Evalue 9.00e-123
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 330.0
  • Bit_score: 457
  • Evalue 1.30e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ACCCACCAGACGCTGCAGCAGTTGTCGCTAGATGCCGACCTGTCCGGCATCCAGACCAGCTACGACCACGTGATCACCGACAACCGCGTCGTGGTCAACGGGCTGCTCGGCTTTGGCCTCGACTTCGGCGACAACCGCGTCCGCTGGACCAATCTGTACATCCGCGACACGCTGAAGCAGGCGGACTTGTCCGCCGGGACCGACGCCAACCAGCAGGGTCGCGACATCCTGAAGCAGGGCACCGCCTGGTACGAGCGCCAGTTGATCAACACCCAGGTCGTCGGCGCGTTCAATCTGGGCGACGTCAACCTCGACGTGCGTGGCGGCTACGCCAATTCGCAGCGCGAGGCGCCGTACGAGCGCAGCTTCACCTACGTCCGGACCAACCAGGCGGCTGACCCGACCGGCGCCAAGTTCGTCAACGACCTTGGCGGCAACAAGGGCGACGCGCGGATCGCGTTCAGCGACCTGAACGAGGACCTGTATTCGGGCGGTCTCGACCTTGGCTACCGGATCAGCCCCGCGCTGAAGGTCGGCGTCGGCTACGCCTATTCGGACACTACCCGCAACTCCGTCCGCCGCGAGTTCCAGTTCCGCGCGTCGGGTCTGCCGGTCAGCGTGCAGCAGTTGCGGCCCGACTTCCTGCTGTCCGACTACACGATCCAGACCTACGGCATCACGATGCTGGAGACGACGGCGAGCGACGGCACCGCCGCGTTCGACGCCGGGCTCGAGGTCCACGCCGGCTACGGCCAGGTCATCGCGCAGGTGCTGCCGGCGGTGAACATCACCGCCGGCGTCCGCTACGAGCGGGGGCTGCAGACGGTGGAGGCGGTCGACCTGTTCGGCACCGGCCTCGGCACCGCGTTCAACACCCGGCTGCAGAAGGATTACTGGCTGCCGGCGCTGACAGCGACGATCGACGTCGCGCCGCAGATGCAGCTGCGCTTCAACGGGTCGCGCACGCTGGCGCGGCCGCAG
PROTEIN sequence
Length: 327
THQTLQQLSLDADLSGIQTSYDHVITDNRVVVNGLLGFGLDFGDNRVRWTNLYIRDTLKQADLSAGTDANQQGRDILKQGTAWYERQLINTQVVGAFNLGDVNLDVRGGYANSQREAPYERSFTYVRTNQAADPTGAKFVNDLGGNKGDARIAFSDLNEDLYSGGLDLGYRISPALKVGVGYAYSDTTRNSVRREFQFRASGLPVSVQQLRPDFLLSDYTIQTYGITMLETTASDGTAAFDAGLEVHAGYGQVIAQVLPAVNITAGVRYERGLQTVEAVDLFGTGLGTAFNTRLQKDYWLPALTATIDVAPQMQLRFNGSRTLARPQ