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scnpilot_solids1_trim150_scaffold_66_curated

Search features with annotation key words

Displaying items 91-115 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_66_curated_91
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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95499..97451
DNA (1953bp) protein (651aa)
Leukotriene-A(4) hydrolase (EC:3.3.2.6)
aminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E00E89
Aminopeptidase {ECO:0000313|EMBL:AHY57662.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_66_curated_92
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(97689..99002)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036F4C32
Acetamidase/Formamidase family protein {ECO:0000313|EMBL:EZP45235.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Acetamidase/Formamidase
scnpilot_solids1_trim150_scaffold_66_curated_93
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99331..100071
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F38DD5
Stenotrophomonas maltophilia strain ZBG7B contig_86, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81002.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_94
unknown

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100077..100598
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_66_curated_95
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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100598..100834
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031622A2
30S ribosomal protein S3 {ECO:0000313|EMBL:AKC88230.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_96
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(100914..101846)
DNA (933bp) protein (311aa)
adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20]
Adenosine kinase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K3H5_STEMA
Sugar kinase {ECO:0000313|EMBL:EZP44997.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
scnpilot_solids1_trim150_scaffold_66_curated_97
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102122..103168
DNA (1047bp) protein (349aa)
Rod shape-determining protein mreB n=3 Tax=Stenotrophomonas maltophilia RepID=J7SYJ6_STEMA
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Rod shape-determining protein mreB {ECO:0000313|EMBL:EJP79177.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_66_curated_98
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103295..104356
DNA (1062bp) protein (354aa)
rod shape-determining protein MreC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003824881
mreC; Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:ACF53152.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_66_curated_99
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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104353..104838
DNA (486bp) protein (162aa)
Probable rod shape-determining protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UC57_XANAP
mreD; rod shape-determining protein; K03571 rod shape-determining protein MreD
Probable rod shape-determining protein {ECO:0000313|EMBL:CBA15325.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids1_trim150_scaffold_66_curated_100
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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104842..106842
DNA (2001bp) protein (667aa)
Penicillin-binding protein 2 (PBP-2) n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSW4_STEMA
Penicillin-binding protein 2 (PBP-2) {ECO:0000313|EMBL:CCH14156.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
mrdA; Penicillin-binding protein 2 (PBP-2); K05515 penicillin-binding protein 2
scnpilot_solids1_trim150_scaffold_66_curated_101
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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106839..107969
DNA (1131bp) protein (377aa)
rod shape-determining protein RodA n=1 Tax=Xanthomonas sacchari RepID=UPI00026320E7
Rod shape-determining protein RodA {ECO:0000313|EMBL:AJC47128.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
mrdB; putative rod shape-determining protein RodA; K05837 rod shape determining protein RodA
scnpilot_solids1_trim150_scaffold_66_curated_102
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108420..109517
DNA (1098bp) protein (366aa)
mltB; putative murein hydrolase (EC:3.2.1.-); K08305 membrane-bound lytic murein transglycosylase B [EC:3.2.1.-]
murein transglycosylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AA151
Stenotrophomonas maltophilia strain ZBG7B contig_124, whole genome shotgun sequence {ECO:0000313|EMBL:KIP79433.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_66_curated_103
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109514..110731
DNA (1218bp) protein (406aa)
Rare lipoprotein A n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UTB0_STEMA
RlpA protein {ECO:0000313|EMBL:EZP46656.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rlpA; putative exported rare lipoprotein A; K03642 rare lipoprotein A
scnpilot_solids1_trim150_scaffold_66_curated_104
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110847..112046
DNA (1200bp) protein (400aa)
dacC; putative penicillin-binding protein (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Putative penicillin-binding protein {ECO:0000313|EMBL:CAQ47442.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CAQ47442.1};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Putative penicillin-binding protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FUT2_STRMK
scnpilot_solids1_trim150_scaffold_66_curated_105
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112119..113177)
DNA (1059bp) protein (353aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003794CDB
Membrane protein {ECO:0000313|EMBL:AHY57676.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_106
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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113458..114435
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CR14_STEMA
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EED40216.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_107
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114573..114860
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8X6_9GAMM
UPF0250 protein SSKA14_2410 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein; K09158 hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_108
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114848..115558
DNA (711bp) protein (237aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" so
lipB; Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
lipoate-protein ligase B n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AEDC9
scnpilot_solids1_trim150_scaffold_66_curated_109
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115574..116581
DNA (1008bp) protein (336aa)
lipA; Lipoate synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia
Lipoyl synthase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KK98_STEMA
scnpilot_solids1_trim150_scaffold_66_curated_110
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116967..119141
DNA (2175bp) protein (725aa)
tail-specific protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Tail-specific protease n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSV4_STEMA
Tail-specific protease {ECO:0000313|EMBL:CCH14146.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_66_curated_111
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119237..119782
DNA (546bp) protein (182aa)
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377D173
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP18366.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
scnpilot_solids1_trim150_scaffold_66_curated_112
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119779..121065
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003653000
Uncharacterized protein {ECO:0000313|EMBL:AHY57682.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_113
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121050..121964
DNA (915bp) protein (305aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036F9CDC
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EMI48548.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
scnpilot_solids1_trim150_scaffold_66_curated_114
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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121983..122330
DNA (348bp) protein (116aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NER2_9GAMM
putative periplasmic or secreted lipoprotein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_66_curated_115
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122524..123015
DNA (492bp) protein (164aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
sensor histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB4567
two-component system sensor protein
Displaying items 91-115 of 115 in total

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