ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_66_curated_22

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 20178..21089

Top 3 Functional Annotations

Value Algorithm Source
rmd; NDP-hexose oxidoreductase (EC:5.1.3.2) similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 302.0
  • Bit_score: 352
  • Evalue 1.30e-94
NAD-dependent dehydratase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A781 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 296.0
  • Bit_score: 358
  • Evalue 5.60e-96
NAD-dependent dehydratase {ECO:0000313|EMBL:KGR62302.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 302.0
  • Bit_score: 355
  • Evalue 6.60e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas vasicola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCATGAGCTCAGCGGGCGCCGCATTCTGGTGACGGGCGCCTCCGGTTTCGTCGGCAGGCATCTGATGGCCTCCGCGGCCTTCGCCGGTGTCGAGTTCGCGACCCTGCAGAGCGTGGACATCCGCGACCGGCCGGCGCTCGAGGCCGAGGTCGCTTCGATCAGGCCCGATCATGTCGTCCATCTCGCGGCGCAGAGCTTCGTGCCGCGGTCCTTCGAGGATCCCGCCGGAACCCTCGAGGTCAACCTGATGGGAACCTTGAACCTGCTGCAGTCGCTGGACAAGGCGGGTTTCTCCGGCCGTTTCCTGTATGTCAGCTCCGGCGACGTGTATGGAGCGGTGGATGAATCGCAACTGCCGGTAAAGGAGGAACTCCTCCCCGCGCCGAGGAATCCCTACGCGGTGTCCAAGCTGGCGGCAGAGCAGCTGTGCCTGCAGTGGCATCGATCCAACAGGCTTGATGTCGTGGTCGCCCGCCCGTTCAACCATGTCGGTCCCGGCCAGGACAGTGCATTCGTGGTACCGGCGCTCGCCGCGCAGGTGGTGGCGATCGCGCAGGGGCGGGCCGCGCCGGTCATCAGCGCCGGGGACATCGACGTGACCCGGGATTTCACCGATGTCCGGGATATTGTTTCCGGCTATGCCAGCCTGCTGGGTGCCGGCGCCCCTGGAAGGGTCTACCAGCTCTGCAGCGGGGTCGAGCGCAGCGTCCGCGGGATCCTGCAGCAGCTCCTGGCATTGAAAGGGGTGGACGCCCGGATAGAGCAGGATCCTTCCAAGTTCCGCCCCGCGGAACAGCGCCGGATGGTGGCGGACAACAACCGGGTATCGCGCGATACCGGCTGGCTCCCCGCCGTCCAATGGGAAACGACGTTGCAAGACATTATTGAAGAAATGGAGAGCAGGACGTGA
PROTEIN sequence
Length: 304
MHELSGRRILVTGASGFVGRHLMASAAFAGVEFATLQSVDIRDRPALEAEVASIRPDHVVHLAAQSFVPRSFEDPAGTLEVNLMGTLNLLQSLDKAGFSGRFLYVSSGDVYGAVDESQLPVKEELLPAPRNPYAVSKLAAEQLCLQWHRSNRLDVVVARPFNHVGPGQDSAFVVPALAAQVVAIAQGRAAPVISAGDIDVTRDFTDVRDIVSGYASLLGAGAPGRVYQLCSGVERSVRGILQQLLALKGVDARIEQDPSKFRPAEQRRMVADNNRVSRDTGWLPAVQWETTLQDIIEEMESRT*