ggKbase home page

scnpilot_solids1_trim150_scaffold_285_curated_31

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 31324..33114

Top 3 Functional Annotations

Value Algorithm Source
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 596.0
  • Bit_score: 1151
  • Evalue 0.0
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 597.0
  • Bit_score: 1151
  • Evalue 0.0
succinate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000316D6FE similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 596.0
  • Bit_score: 1162
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1791
ATGTCCGCTTACAACATCACTGAACACAAGGTCGACATGGTGGTCGTCGGCGCCGGCGGCGCCGGCCTGCGCGCGACCTTCGGCCTGGCCCAGAAGGGCCTGCAGACCGTGTGCATCACCAAGGTCTTCCCGACCCGCTCGCACACCGTGGCGGCGCAGGGCGGCATTTCCGCCGCGCTGGGCAACATGGGCGAGGACGACTGGCGTTACCACTTCTACGACACCATCAAGGGTTCGGACTGGCTGGGCGACCAGGACGCCATCGAGTACATGGTGCGCGAGGCGATCCCGGCGATCATCGAACTGGAGCACTACGGCGTTCCGTTCAGCCGCACCGAGGACGGCAAGATCTACCAGCGTCCGTTCGGCGGCATGACCACCAAGTACGGCGAAGGCCCGTCCGCGCAGCGCACCTGCGCCGCCGCCGACCGTACCGGCCACGCCATGCTGCACACCCTGTACCAGCAGTCGCTGGCGCACAACGCGCGCTTCATGATCGAGTACTTCGCGCTCGACCTGATCTTCGACGAAGAGGGCGTGTGCCGCGGCGTGCTGGCCCTGGACATGGCCGAGGGCACCCTGCACCTGTTCCGCGCCCATGGCGTGGTGCTGGCCACCGGCGGCTACGGTCGTGCCTATTTCAGCGCCACCTCGGCGCATACCTGTACCGGTGACGGCGGCGGCCTCGTGGCCCGTGCCGGGCTGCCGCTGCAGGACATGGAATTCGTGCAGTTCCACCCGACCGGCATCTATGGCGCCGGCTGCCTGATCACCGAAGGCGTGCGCGGCGAAGGCGGCATCCTGCGCAACAGCAGCGGCGAGCGCTTCATGGAGCGCTACGCACCGCATTACAAGGACCTGGCCTCGCGCGACGTGGTCAGCCGTTCGATGACCATCGAGATCCGCGAAGGCCGCGGCGTCGGCGAGCACAAGGACCACATCCTGCTCGACCTGACCCACCTGGGCCCGGGCGTGATCGACGAGAAGCTGCCGGGCATCGCCGAGAGCGCGCGCATCTTCGCCGGCGTCGACGTGCACAAGCAGCCGATCCCGGTGATCCCGACCGTGCACTACAACATGGGTGGCATCCCGACCAACTACCACGGCGAAGTGGTGCGCAAGGTCGGCGACAACCCCGATGCGGTGGTGCCGGGCCTGTACGCCATCGGCGAGGCGGCCTGCGTGTCGGTGCATGGCGCCAACCGCCTGGGCTCCAACTCGCTGCTCGACCTGGTGGTGTTCGGCCGCGCGGTGGCCAACCGCTGCGCCGAGACGATCAAGCCGGGCGCGCCGCACAAGACCCTGGGTTCGGACGCCTGCGACAAGGCGCTGGGCCTGCTGGACAAGCTGCGCCATGCCAATGGCGACACCCCGACCGCCGTGATCCGCGACCGCATGCAGCGCACGATGCAGGCAGACGCCGCGGTGTTCCGCACCAGCAAGACGCTGGCCGAGGGCTGCGCGAAGATGGCCGAGGTGTTCGATTCGTTCCAGGACGTCAAGGTCTCCGACCGTTCGCTGGTCTGGAACTCGGACCTGATCGAGACCTACGAGCTCAACAACCTTCTGCTCAACGCCGTGGCCACCATCAACTCGGCCGAGCAGCGCAAGGAAAGCCGCGGCGCCCACGCGCACGAGGACTATCCGGAGCGCGACGACGCCAACTGGATGAAGCACACGCTGGTCAGCGTCGACGAGAAGGGCAAGTGCAGCTTCGACTACCGTCCGGTGCACATGTACACGCTCACCGACGACGTCGCCGTCGTGCCGCCGAAGCCGCGCGTCTACTGA
PROTEIN sequence
Length: 597
MSAYNITEHKVDMVVVGAGGAGLRATFGLAQKGLQTVCITKVFPTRSHTVAAQGGISAALGNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMVREAIPAIIELEHYGVPFSRTEDGKIYQRPFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGVCRGVLALDMAEGTLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVARAGLPLQDMEFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIEIREGRGVGEHKDHILLDLTHLGPGVIDEKLPGIAESARIFAGVDVHKQPIPVIPTVHYNMGGIPTNYHGEVVRKVGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVANRCAETIKPGAPHKTLGSDACDKALGLLDKLRHANGDTPTAVIRDRMQRTMQADAAVFRTSKTLAEGCAKMAEVFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESRGAHAHEDYPERDDANWMKHTLVSVDEKGKCSFDYRPVHMYTLTDDVAVVPPKPRVY*